PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00713g00018.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family NAC
Protein Properties Length: 501aa    MW: 57413 Da    PI: 6.5123
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00713g00018.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM121.67.2e-3814107193
                       NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyW 83 
                               lppGfrFhPtdeelv +yL++k+++kk+el evi+evd+yk+ePwdLp k  + +++ ewyfFs+rd+ky++g+r+nratk+gyW
  Peaxi162Scf00713g00018.1  14 LPPGFRFHPTDEELVAYYLNRKINNKKIEL-EVIPEVDLYKCEPWDLPgKfLLPSKDLEWYFFSPRDRKYPNGSRTNRATKAGYW 97 
                               79****************************.99***************5345556777*************************** PP

                       NAM  84 katgkdkevl 93 
                               katgkd++  
  Peaxi162Scf00713g00018.1  98 KATGKDRKKN 107
                               ******9865 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.7E-3911104IPR003441NAC domain
PROSITE profilePS5100537.07914158IPR003441NAC domain
PfamPF023651.1E-1815108IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 501 aa     Download sequence    Send to blast
EEKFQIKEMA PVALPPGFRF HPTDEELVAY YLNRKINNKK IELEVIPEVD LYKCEPWDLP  60
GKFLLPSKDL EWYFFSPRDR KYPNGSRTNR ATKAGYWKAT GKDRKKNLNI GPKIGDHYAS  120
AASDRSSGNI DLYSEGRSDH DMENSHHDQY AMPLSSATCS SSRASHGSPI NNVATSSHDD  180
DKWMQYLSDE AFSFNNQLIP NYRTLQYHPS KVDIALECAR LQHRFTLPPL EIQNFPQYFR  240
RNPFLAEASQ NLMNQDSWGG NNCAPIDDFS FQPHNDQTHD LGSFHFMEQL KEDQNVRGIA  300
IGDVDHEDFK SDRIVENLRW IGMSDRDLEK TSLEDYKTVP VENVSAIQRE DNIELPGEIS  360
GHHNSFNGLN ETEANNYSMG NNFLGDGDRD GFVYGKIEVS HGFFIATGQS SKTFYHQVTP  420
SRTIRLVKVN GFPIYNIGNS NSRKIPKDKT FLDNFLAFSR KMLGSKEGKY YNVAHVEKKW  480
PYLTLVAALC TIWLHHIVPS F
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A4e-331010411103Stress-induced transcription factor NAC1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2265095e-58AC226509.1 Solanum lycopersicum cultivar Heinz 1706 chromosome 2 clone C02HBa0144P17, complete sequence.
GenBankHG9755145e-58HG975514.1 Solanum lycopersicum chromosome ch02, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009625360.10.0PREDICTED: NAC domain-containing protein 86-like
RefseqXP_016489725.10.0PREDICTED: NAC domain-containing protein 86-like
RefseqXP_019265207.10.0PREDICTED: NAC domain-containing protein 86-like
TrEMBLA0A1S4BLJ40.0A0A1S4BLJ4_TOBAC; NAC domain-containing protein 86-like
TrEMBLA0A314L4810.0A0A314L481_NICAT; Nac domain-containing protein 45
STRINGXP_009625360.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA14952348
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G65910.13e-70NAC domain containing protein 28