PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00714g00519.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family B3
Protein Properties Length: 199aa    MW: 23198.6 Da    PI: 7.7233
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00714g00519.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B340.83.8e-13971771480
                               T-EE--HHH.HTT..............---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EE CS
                        B3  14 grlvlpkkfaeeh..............ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfv 80 
                               +r+ +p   ++++              ++ +e+s++++++d++g+  ++k++ + + +++vl  GW++ vkan+L+ gD+v
  Peaxi162Scf00714g00519.1  97 SRFFIPTGTCNANilnhlnpeerkkleNQHSERSIEVRVMDPKGNIHKMKFTRWLSLKKFVLNHGWNKLVKANDLQKGDTV 177
                               6788888888888888888887777775556799*****************99**************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF037541.7E-1176167IPR005508B3 domain-containing protein
Gene3DG3DSA:2.40.330.103.6E-1481189IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019365.1E-1582189IPR015300DNA-binding pseudobarrel domain
CDDcd100173.67E-1485192No hitNo description
PROSITE profilePS508639.686132198IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    Send to blast
MTKIRIFGKD FKAIRLFGEW LTVALEKEQE EQETRLILQE DQEAGLMLQE EQEAGVIQRD  60
LPPPNNMYEA IQLAGGSEPV YIGRKKVEQS DIKPDLSRFF IPTGTCNANI LNHLNPEERK  120
KLENQHSERS IEVRVMDPKG NIHKMKFTRW LSLKKFVLNH GWNKLVKAND LQKGDTVDLW  180
HFRISSEPYF AINIIKNQN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009774698.14e-63PREDICTED: putative B3 domain-containing protein At3g49610
RefseqXP_016495804.14e-63PREDICTED: putative B3 domain-containing protein At3g49610
TrEMBLA0A1S4C4149e-62A0A1S4C414_TOBAC; putative B3 domain-containing protein At3g49610
TrEMBLA0A1U7W7U39e-62A0A1U7W7U3_NICSY; putative B3 domain-containing protein At3g49610
STRINGXP_009774698.11e-62(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA116791115
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05930.14e-07B3 family protein