PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00732g00236.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family WRKY
Protein Properties Length: 296aa    MW: 33511.5 Da    PI: 5.4333
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00732g00236.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY57.82.2e-18126183159
                               ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
                      WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                               +dDg++WrKYGqK++ +s++pr    Ct++   +C+++k+v++ +++p ++++tY g+H ++
  Peaxi162Scf00732g00236.1 126 VDDGHAWRKYGQKQILNSTYPR----CTHKydqKCQATKQVQKIQDNPPLFKTTYYGQHICK 183
                               59****************9996....77777779*************************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.805.0E-20112183IPR003657WRKY domain
PROSITE profilePS5081115.376121180IPR003657WRKY domain
SuperFamilySSF1182906.8E-19123183IPR003657WRKY domain
SMARTSM007741.7E-29126184IPR003657WRKY domain
PfamPF031062.0E-18127183IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    Send to blast
MEYSPLPENS STDLKRAIER LIRGRELTQR LKEIMKKPLE DGVTTNIMAE NLVVKIMDSF  60
SETISMINSG EFDEVSQVTA ISSPSSEKSS EDSSGSCKGS SLKDRRGCYK RRKTLEINIK  120
ESSALVDDGH AWRKYGQKQI LNSTYPRCTH KYDQKCQATK QVQKIQDNPP LFKTTYYGQH  180
ICKAFPRESQ IILDTQIDGD SSIILNFDQK TINHNYHPYY NNVPTFPSIK QETKEEVLQI  240
SSIDHMTPAT IEASGSHMAA VLSPDVISSG GVYSSCTSSD NLDNDFDFEE YLWNFE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A2e-18126183869OsWRKY45
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ7060954e-67HQ706095.1 Solanum lycopersicum WRKY3 (WRKY3) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019228516.11e-138PREDICTED: probable WRKY transcription factor 70
TrEMBLA0A314KN781e-137A0A314KN78_NICAT; Putative wrky transcription factor 70
STRINGXP_009597703.11e-135(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA42302143
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.14e-31WRKY DNA-binding protein 70