PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00740g00328.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family Dof
Protein Properties Length: 258aa    MW: 28714.5 Da    PI: 8.4848
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00740g00328.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof125.71.4e-393191262
                    zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                              ke+a++cprC+stntkfCyynnyslsqPryfCk+CrryWt+GG+lrnvPvGgg+rknk+ss
  Peaxi162Scf00740g00328.1 31 KEQAVNCPRCNSTNTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRSS 91
                              7899******************************************************975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074787.0E-282583IPR003851Zinc finger, Dof-type
PfamPF027019.7E-343389IPR003851Zinc finger, Dof-type
PROSITE profilePS5088429.0683589IPR003851Zinc finger, Dof-type
PROSITE patternPS0136103773IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    Send to blast
MDTSQWPQGI GVVKTVEPSK TVQERKPRPQ KEQAVNCPRC NSTNTKFCYY NNYSLSQPRY  60
FCKTCRRYWT EGGSLRNVPV GGGSRKNKRS SFNNNNNSSY SNNSSSSTSS SSKKLPDLTT  120
PKINEPHHDL NFSNISEFMA LPFGHDHNKG LHLMNPNSTT FLDSNTLFSS TTGLPNLHDL  180
KPTLNFSLDH GFEHNGYGNL QGAAQEITGA KLFFPLDDLK TVSTDPNDHH EFEQNKGHHH  240
QAAESNGFWN GMLGGGSS
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor specifically involved in the maternal control of seed germination. Regulates transcription by binding to a 5'-AA[AG]G-3' consensus core sequence. May ensure the inactivity of a component that would be activated to trigger germination as a consequence of red light perception.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001312901.11e-106dof zinc finger protein DOF1.8-like
RefseqXP_009801284.11e-106PREDICTED: dof zinc finger protein DOF1.8-like
SwissprotQ433851e-51DOF37_ARATH; Dof zinc finger protein DOF3.7
TrEMBLA0A068PXR91e-104A0A068PXR9_TOBAC; Dof zinc finger protein
TrEMBLA0A1U7YPX61e-104A0A1U7YPX6_NICSY; dof zinc finger protein DOF1.8-like
STRINGXP_009801284.11e-105(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8824419
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61850.32e-45Dof family protein