PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00740g00548.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family HD-ZIP
Protein Properties Length: 230aa    MW: 27088.4 Da    PI: 4.8605
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00740g00548.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox55.21.2e-173080656
                              S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
                  Homeobox  6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                              +ft+eq++ Le +F+++ ++  +++ +LA+ +gL+ rqV +WFqN+Ra++k
  Peaxi162Scf00740g00548.1 30 RFTDEQVKLLEFMFNQETKLEPRKKLQLARDIGLQPRQVAIWFQNKRARWK 80
                              7*************************************************9 PP
2HD-ZIP_I/II1149e-3728118393
               HD-ZIP_I/II   3 krrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeL 87 
                                +r+++eqvklLE +F++e+kLep++K +lar++glqprqva+WFqn+RAR+k+kqlE+dy+ Lk+++d+l+ + ++L++e+e+L
  Peaxi162Scf00740g00548.1  28 VKRFTDEQVKLLEFMFNQETKLEPRKKLQLARDIGLQPRQVAIWFQNKRARWKSKQLEHDYTILKANFDKLNMQFQTLKTEKERL 112
                               58*********************************************************************************** PP

               HD-ZIP_I/II  88 reelke 93 
                                 +l++
  Peaxi162Scf00740g00548.1 113 LIQLET 118
                               988875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466892.92E-172084IPR009057Homeodomain-like
PROSITE profilePS5007116.4222282IPR001356Homeobox domain
SMARTSM003891.8E-132286IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.603.3E-192989IPR009057Homeodomain-like
CDDcd000862.22E-133083No hitNo description
PfamPF000464.3E-153080IPR001356Homeobox domain
PRINTSPR000314.1E-55362IPR000047Helix-turn-helix motif
PROSITE patternPS0002705780IPR017970Homeobox, conserved site
PRINTSPR000314.1E-56278IPR000047Helix-turn-helix motif
PfamPF021835.6E-1482123IPR003106Leucine zipper, homeobox-associated
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    Send to blast
MEPEECPALE KCETPKSKKA LKKKSENVKR FTDEQVKLLE FMFNQETKLE PRKKLQLARD  60
IGLQPRQVAI WFQNKRARWK SKQLEHDYTI LKANFDKLNM QFQTLKTEKE RLLIQLETLN  120
DQLENKLVRG SRSHDSKDNE LYTSSENGGT DLELKDSPGC SNARIDYMMV KEEDDDTVEE  180
TNKYLKPKEE AEFWNLEELE DNSLESPEHW SVGLGSFFSQ PCDNSKLWDF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009611805.11e-121PREDICTED: homeobox-leucine zipper protein ATHB-7-like
RefseqXP_016442723.11e-121PREDICTED: homeobox-leucine zipper protein ATHB-7-like
TrEMBLA0A1S3XRZ91e-120A0A1S3XRZ9_TOBAC; homeobox-leucine zipper protein ATHB-7-like
STRINGXP_009611805.11e-120(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA20412363
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46680.14e-40homeobox 7