PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00767g00212.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family HD-ZIP
Protein Properties Length: 262aa    MW: 30033.1 Da    PI: 4.6105
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00767g00212.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox59.46e-194597456
                              -SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
                  Homeobox  4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                               ++f++eq++ Le++Fe + ++  +++ +LA++lgL+ rqV +WFqN+Ra++k
  Peaxi162Scf00767g00212.1 45 TRRFSDEQIKSLETMFETETKLEPRKKLQLARELGLQPRQVAIWFQNKRARWK 97
                              469*************************************************9 PP
2HD-ZIP_I/II123.11.4e-3944135293
               HD-ZIP_I/II   2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekevee 86 
                               + rr+s+eq+k+LE++Fe+e+kLep++K +lareLglqprqva+WFqn+RAR+k+kqlE+dy+ Lk++y++l+++ e+L+ke+++
  Peaxi162Scf00767g00212.1  44 NTRRFSDEQIKSLETMFETETKLEPRKKLQLARELGLQPRQVAIWFQNKRARWKSKQLERDYSILKANYNNLASQYESLKKEKQS 128
                               569********************************************************************************** PP

               HD-ZIP_I/II  87 Lreelke 93 
                               L  +l++
  Peaxi162Scf00767g00212.1 129 LVMQLQK 135
                               **99987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466897.35E-1922101IPR009057Homeodomain-like
PROSITE profilePS5007117.543999IPR001356Homeobox domain
SMARTSM003891.6E-1642103IPR001356Homeobox domain
PfamPF000462.7E-164597IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.601.7E-1945106IPR009057Homeodomain-like
CDDcd000868.41E-1546100No hitNo description
PRINTSPR000311.1E-57079IPR000047Helix-turn-helix motif
PROSITE patternPS0002707497IPR017970Homeobox, conserved site
PRINTSPR000311.1E-57995IPR000047Helix-turn-helix motif
PfamPF021834.9E-1699141IPR003106Leucine zipper, homeobox-associated
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009414Biological Processresponse to water deprivation
GO:0009738Biological Processabscisic acid-activated signaling pathway
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    Send to blast
MFDVGEFSSS SSAAALSAEC FSTCSSFSSL SSSKKKKSNS NNKNTRRFSD EQIKSLETMF  60
ETETKLEPRK KLQLARELGL QPRQVAIWFQ NKRARWKSKQ LERDYSILKA NYNNLASQYE  120
SLKKEKQSLV MQLQKLNDLM QKSQSKGEYC RQETDAIGFD QESDNREDIS KNKEMDTKPS  180
LSYEYLSEHG GINGVISDDD SSIKADYFGL DEDQDHLLKM VEAADSTSLT SPENWGCSLD  240
DDGLLDEQPN TTNYDQWWDF WS
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription activator that may act as growth regulators in response to water deficit. {ECO:0000269|PubMed:15604708, ECO:0000269|PubMed:8771791}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00320DAPTransfer from AT2G46680Download
Motif logo
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By water deficit, by abscisic acid (ABA) and by salt stress. {ECO:0000269|PubMed:16055682, ECO:0000269|PubMed:8771791}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019226444.11e-123PREDICTED: homeobox-leucine zipper protein ATHB-12-like
SwissprotP468972e-71ATHB7_ARATH; Homeobox-leucine zipper protein ATHB-7
TrEMBLA0A314KRV91e-121A0A314KRV9_NICAT; Homeobox-leucine zipper protein athb-7
STRINGXP_009792428.11e-115(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA20412363
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46680.15e-66homeobox 7
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Zhou SF, et al.
    Membrane-associated transcription factor peptidase, site-2 protease, antagonizes ABA signaling in Arabidopsis.
    New Phytol., 2015. 208(1): p. 188-97
    [PMID:25919792]