PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00772g00076.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family bHLH
Protein Properties Length: 255aa    MW: 28633.2 Da    PI: 6.3517
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00772g00076.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH50.24.5e-1673125155
                               CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
                       HLH   1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                               ++ +hn+ Er RR+riNs ++ Lr+l+P  +   + kKls  +++ k+ +YI +Lq
  Peaxi162Scf00772g00076.1  73 KKLNHNASERDRRKRINSLYSSLRSLIPAsD---HTKKLSIPSTVSKVLKYIPELQ 125
                               6789*************************44...6666***************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.5772124IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.4E-1473141IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.27E-1673141IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.82E-1373129No hitNo description
PfamPF000102.6E-1373125IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.8E-1178130IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010106Biological Processcellular response to iron ion starvation
GO:0055072Biological Processiron ion homeostasis
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    Send to blast
MLAISSSPLF STNNFGWLLD DPITHELLNT STGTSGSAVA LNSSSSQTRL QHCESKKFDQ  60
IDGDHHQPHE MVKKLNHNAS ERDRRKRINS LYSSLRSLIP ASDHTKKLSI PSTVSKVLKY  120
IPELQDEVER LIKKKEELTS RTISKTEHLA DFNKQTNGGI ESSSLIVSAS QAGDNEVVIH  180
LSTRKINKGS FAEAVSELED EGLVLLNASC LETFEERVFY TLHFQVQGTM AVEVDMLRDK  240
LSSYFEKEEK LLLQQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018633333.11e-128PREDICTED: transcription factor ORG2-like isoform X2
TrEMBLA0A1S4AF171e-125A0A1S4AF17_TOBAC; transcription factor ORG2-like
STRINGXP_009625856.11e-126(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA22262256
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.17e-51bHLH family protein