PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00774g00220.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family GRAS
Protein Properties Length: 222aa    MW: 25649.3 Da    PI: 6.9815
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00774g00220.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS26.95.7e-0962110351
                      GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaa 51 
                               +lL++cA+a+++ d++ a + L+ +++++s +gd  +R+a+y++  L+a
  Peaxi162Scf00774g00220.1  62 SLLTQCAQAITNYDTRTAYERLKLIRQHSSLYGDEAERIAHYIADELHA 110
                               79*****************************************988875 PP
2GRAS82.85.8e-26109216154262
                      GRAS 154 skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkv 238
                               ++e++eetg+rLa++++ ++vpfe+n+ +ak+ ++++le+L+++++E+l+Vn+ ++l ++++e   ++s+rd+vL+l+++++P+v
  Peaxi162Scf00774g00220.1 109 HAERVEETGHRLANYCKMFDVPFEYNA-IAKKGDSIQLEDLKINRNEMLVVNCFYRLIYVPAEIEYQNSPRDDVLRLIRQIKPDV 192
                               6799***********************.7******************************************************** PP

                      GRAS 239 vvvveqeadhnsesFlerfleale 262
                               + +   +  +ns+ F+++f ea+ 
  Peaxi162Scf00774g00220.1 193 FLHGIINGTYNSSFFVTKFKEAVF 216
                               *********************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5098514.8741222IPR005202Transcription factor GRAS
PfamPF035142.0E-23109216IPR005202Transcription factor GRAS
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    Send to blast
MTLICSYNNP GFYTDPPCCQ CDQSIEEKLA YKPLPGQSRI PKQGRPRANA KPVNTNPLDL  60
WSLLTQCAQA ITNYDTRTAY ERLKLIRQHS SLYGDEAERI AHYIADELHA ERVEETGHRL  120
ANYCKMFDVP FEYNAIAKKG DSIQLEDLKI NRNEMLVVNC FYRLIYVPAE IEYQNSPRDD  180
VLRLIRQIKP DVFLHGIING TYNSSFFVTK FKEAVFNLLC LT
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015165701.12e-55PREDICTED: LOW QUALITY PROTEIN: scarecrow-like protein 9
TrEMBLA0A2G2ZE122e-53A0A2G2ZE12_CAPAN; Scarecrow-like protein 34
TrEMBLA0A2G3CBK23e-53A0A2G3CBK2_CAPCH; Scarecrow-like protein 30
STRINGXP_010535475.15e-46(Tarenaya hassleriana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1713644
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.17e-37GRAS family protein