PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00776g00329.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family WRKY
Protein Properties Length: 603aa    MW: 66196.2 Da    PI: 7.1944
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00776g00329.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.42e-30325382260
                               --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
                      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                               +DgynWrKYGqK v+g+ef+rsYYrCt+++C +kk+vers+ d+++++i+Y g+H+h+k
  Peaxi162Scf00776g00329.1 325 EDGYNWRKYGQKLVRGNEFTRSYYRCTHPNCVAKKQVERSH-DGHITDIHYIGKHEHPK 382
                               7****************************************.***************85 PP
2WRKY102.52.5e-32499557159
                               ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                      WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                               ++Dgy+WrKYGqK+vkg+++prsYYrC+sagCp+kk+ver+++d k+v++ Yeg+H h+
  Peaxi162Scf00776g00329.1 499 VNDGYRWRKYGQKMVKGNPNPRSYYRCSSAGCPAKKHVERASHDSKLVITAYEGQHVHD 557
                               58*******************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081122.584319383IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.7E-26321383IPR003657WRKY domain
SuperFamilySSF1182901.57E-24322383IPR003657WRKY domain
SMARTSM007742.7E-33324382IPR003657WRKY domain
PfamPF031063.3E-23325381IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.2E-34485559IPR003657WRKY domain
SuperFamilySSF1182905.1E-28491559IPR003657WRKY domain
PROSITE profilePS5081134.968494559IPR003657WRKY domain
SMARTSM007746.3E-38499558IPR003657WRKY domain
PfamPF031061.6E-25500556IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009863Biological Processsalicylic acid mediated signaling pathway
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 603 aa     Download sequence    Send to blast
QKHDPDNVTN RSESEEKGGC ASLSAKVVSD ALQKRLSSDV LAKASQSDQD EGACPTTYQE  60
VSHELQPRDS VDKGIDASQS NQEVNSLSKV PNKDSEDVHQ KKGPDSKGGA PESKVKGSSA  120
SMSVEVVYHE LNKRLSRAEV VYHELNKRLN GDACKASESI REEGAHPAGC QEVSGEAQPT  180
ESVDEGIDGS QSNQEDSSLS KVPEEESDNV HQKKGPKSEG GASESSQVPF LPKKEPYIKA  240
CRSDSPVKDK NISPVPGKTL ESSQQIQSQK MEAVVRPDQE QVTYSIRPEK ALNKLQPRRN  300
PDMGVQALPS DLGINPFRAP EKPSEDGYNW RKYGQKLVRG NEFTRSYYRC THPNCVAKKQ  360
VERSHDGHIT DIHYIGKHEH PKPLNSPQTP PESVVPLKMR RQDMPMGAPR EGEKSIELGQ  420
TCQSIKPSES LLPQTILSDG GCAIDTVRKP HKSGDEADNG GPDSKRQKKE VPKNDDTPPI  480
KYHSEPRNIV QTMSVVDIVN DGYRWRKYGQ KMVKGNPNPR SYYRCSSAGC PAKKHVERAS  540
HDSKLVITAY EGQHVHDVPP SRTVMQNPAG ADSNTTRISG EATSESGENK HVGVDRVLHI  600
GAN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A3e-34326560275WRKY transcription factor 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00094SELEXTransfer from AT2G04880Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMap-Retrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019250093.10.0PREDICTED: WRKY transcription factor 1-like isoform X2
TrEMBLA0A1S4APL90.0A0A1S4APL9_TOBAC; probable WRKY transcription factor 2 isoform X2
STRINGXP_009605529.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA45582242
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G04880.26e-75zinc-dependent activator protein-1