PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00800g00054.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family WRKY
Protein Properties Length: 370aa    MW: 40903.1 Da    PI: 10.1442
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00800g00054.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.11.2e-30297354359
                               -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                      WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                               D ++WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ +dp+++++tYegeH+h+
  Peaxi162Scf00800g00054.1 297 DDFSWRKYGQKPIKGSPHPRGYYKCSSIrGCPARKHVERALDDPNILIVTYEGEHDHP 354
                               99***********************9988****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF105337.0E-17244293IPR018872Zn-cluster domain
Gene3DG3DSA:2.20.25.803.9E-32284354IPR003657WRKY domain
PROSITE profilePS5081130.251290356IPR003657WRKY domain
SuperFamilySSF1182901.44E-26292355IPR003657WRKY domain
SMARTSM007745.6E-37295355IPR003657WRKY domain
PfamPF031064.5E-26297354IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 370 aa     Download sequence    Send to blast
MAVDLMTSSY RNNNNYTSKI EENAMQEAAT ASLQSVEKLI RLLSQSQQQQ QKKGFQDPSK  60
KANPTIEFSS DYLAVADTAV NKFKKFISIL DKSRTGHARF RRGPITNTPS PSLQPKQEPE  120
LIRQPVASQN RPVEENENSQ TGTRIYCPTP VQRLPPLPHN HNHNQQNQLQ LNQLVKNGSL  180
ERKESMTTIN FAAPSPANSF ISSLTGDTES LQPSSMTSSG FQITNMSQVS SASGRPPLSS  240
SSFKRKCSSS MDDSAVKCSS AGGSSGRCHC PKKRKSKVKR VVRIPAISMK MADIPPDDFS  300
WRKYGQKPIK GSPHPRGYYK CSSIRGCPAR KHVERALDDP NILIVTYEGE HDHPFSITET  360
PPAAIVLESS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A7e-22283353271WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By salicylic acid and strongly during leaf senescence. {ECO:0000269|PubMed:11449049, ECO:0000269|PubMed:11722756}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016474474.10.0PREDICTED: probable WRKY transcription factor 7
SwissprotQ9STX01e-101WRKY7_ARATH; Probable WRKY transcription factor 7
TrEMBLA0A1S4ACY90.0A0A1S4ACY9_TOBAC; probable WRKY transcription factor 7
STRINGXP_009600900.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12202479
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24240.19e-73WRKY DNA-binding protein 7