PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peaxi162Scf00813g00118.1

Organism

Petunia axillaris

Taxonomic ID

33119

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia

Family

bHLH

Protein Properties

Length: 231aa MW: 26953.3 Da PI: 9.9787

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peaxi162Scf00813g00118.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	18.7	3.1e-06	77	123	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h + Er RR++ +++f L +llP +K +K +i+ A + I +Lq Peaxi162Scf00813g00118.1 77 KHMIKERIRREKQKESFLALHKLLPMG-----TKGEKNAIVLTAARRIEELQ 123 68999********************97.....79999999999999999998 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	7.07E-10	69	137	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	2.50E-6	71	124	No hit	No description
PROSITE profile	PS50888	10.861	73	122	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	1.5E-6	77	141	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0009414	Biological Process	response to water deprivation
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 231 aa Download sequence Send to blast
MEEFFQVQWF EDEAFSVNKS CFMSYKNQPF EGIGGSSKNG NVSMNHRNMN KRMMEFLKKS 60 WSPQIGEVKM ERERVHKHMI KERIRREKQK ESFLALHKLL PMGTKGEKNA IVLTAARRIE 120 ELQKYKEILK RRNDELQRIL AESEKGKFDK AKIKVKVNYP ISGIDSMLQV LECLKNSGSK 180 VNAIQSNFSQ QEFTTMLEIE TKVSVLLFLP HGSRIVCMPT FYNGDFLENC V

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009614938.1	1e-101	PREDICTED: transcription factor bHLH92
TrEMBL	A0A1J6I2W2	3e-99	A0A1J6I2W2_NICAT; Transcription factor bhlh92
STRING	XP_009614938.1	1e-100	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA12463	18	21

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43650.1	1e-40	bHLH family protein