PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00835g00114.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family WRKY
Protein Properties Length: 336aa    MW: 37422.5 Da    PI: 7.2024
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00835g00114.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.76.7e-30166226160
                               ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS-- CS
                      WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhek 60 
                               ++Dgy+WrKYGqK+ +++++pr+Y++C++a +Cpvkkkv+rs ed+++++ tYegeHnh+k
  Peaxi162Scf00835g00114.1 166 VKDGYQWRKYGQKVTRDNPYPRAYFKCSFApSCPVKKKVQRSLEDQSIIVATYEGEHNHSK 226
                               58***************************99****************************85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.0E-28161227IPR003657WRKY domain
PROSITE profilePS5081125.132161227IPR003657WRKY domain
SuperFamilySSF1182906.8E-25164225IPR003657WRKY domain
SMARTSM007744.6E-34166226IPR003657WRKY domain
PfamPF031063.6E-24167224IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    Send to blast
MEFFLLDTSL ELNSRPLPIL DEVPKQEMQS NLIGLGRDMP ANNEAGDLKE ELSRVSAENK  60
KLTEILSVMC DNYIALRNQL MEYRRQLQNG NIGVDDASAA GSRKRKAAES TSTPNNIIVH  120
HGHYSESSSS DNEDSSCKKP RALEHIKAKN STVYVRNQGS ATTLNVKDGY QWRKYGQKVT  180
RDNPYPRAYF KCSFAPSCPV KKKVQRSLED QSIIVATYEG EHNHSKVQDA GGSDYSVHCS  240
TSLNTSEQNN FTLDHTEPKA LFVNGNGKMN STTSTTTAGT HCHRSSSGGD DHHKPEFHQL  300
LIEQMAASLT KDPSFNAALT AAFQEKILQH NQTDKW
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A1e-191682241974Probable WRKY transcription factor 4
2lex_A1e-191682241974Probable WRKY transcription factor 4
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001312579.11e-117probable WRKY transcription factor 40
TrEMBLD3GDP71e-116D3GDP7_SOLLC; JA-induced WRKY protein
STRINGXP_009764801.11e-115(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA28552450
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.14e-69WRKY DNA-binding protein 40