PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00871g00029.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family Trihelix
Protein Properties Length: 232aa    MW: 26818.1 Da    PI: 9.8513
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00871g00029.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix513.9e-1625115186
                  trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcp 80 
                               +W+++ + +L++a  ++  +l+rg+l++++W++v++++     + ++ +r+ +qCk++++ l+k+yk +k+   + + +  s++p
  Peaxi162Scf00871g00029.1  25 CWSEEATSTLVDAWGKRYMELNRGNLRQKDWQQVADAVnalhgHTKKTQRTDVQCKNRIDTLKKKYKIEKAKIVESNGTLISSWP 109
                               7****************************************99999************************999998888899*** PP

                  trihelix  81 yfdqle 86 
                               +f++l+
  Peaxi162Scf00871g00029.1 110 FFNRLD 115
                               ****97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138373.2E-2623116No hitNo description
Gene3DG3DSA:1.10.10.609.0E-42691IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    Send to blast
MGEIIEYTMM NQTPPTRPMP FREDCWSEEA TSTLVDAWGK RYMELNRGNL RQKDWQQVAD  60
AVNALHGHTK KTQRTDVQCK NRIDTLKKKY KIEKAKIVES NGTLISSWPF FNRLDVLIGN  120
SVKHQYQVAK YTPPVMSLPP PVPMAVPMGV PLPYPRPIAT ATATPAIEKF GETYERVEVM  180
KQKQMVELEK KRMQLAKDLE VQRMHMFVQF AKDLEVQNIK QAKRSTSDDI YS
Functional Description ? help Back to Top
Source Description
UniProtTranscription regulator that may repress the maturation program during early embryogenesis. {ECO:0000269|PubMed:21330492}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028107198.16e-91trihelix transcription factor ASIL1-like isoform X2
SwissprotQ9LJG81e-37ASIL2_ARATH; Trihelix transcription factor ASIL2
TrEMBLA0A1J6L6W02e-88A0A1J6L6W0_NICAT; Trihelix transcription factor asil2
STRINGPOPTR_0003s11850.15e-85(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA13182370
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G05550.25e-42sequence-specific DNA binding transcription factors