PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00910g00017.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family TALE
Protein Properties Length: 703aa    MW: 76882.1 Da    PI: 6.7517
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00910g00017.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox291.9e-093914281954
                               HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
                  Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                               Fe   ++yp+ +++  LAk++gLt +qV++WF N R +
  Peaxi162Scf00910g00017.1 391 FEHflHPYPKDSDKMMLAKQTGLTRSQVSNWFINARVR 428
                               554459******************************88 PP
2BELL114.74.8e-37255326172
                      BELL   1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                               erqe+q+kkakL+++l+eV++rY++y++q+q vis  e++ag+gsak Yt+lAl++iS++FrcLkdai++qi
  Peaxi162Scf00910g00017.1 255 ERQEIQMKKAKLVNMLDEVEQRYRHYHHQMQSVISWLEQAAGIGSAKTYTALALQTISKQFRCLKDAIIGQI 326
                               79*********************************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005747.3E-57176324IPR006563POX domain
PfamPF075262.3E-48183322IPR006563POX domain
PROSITE profilePS5007112.147369432IPR001356Homeobox domain
SMARTSM003899.7E-10372436IPR001356Homeobox domain
CDDcd000864.31E-12372433No hitNo description
SuperFamilySSF466896.42E-17373438IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.2E-28375438IPR009057Homeodomain-like
PfamPF059203.8E-18389428IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009610Biological Processresponse to symbiotic fungus
GO:0009737Biological Processresponse to abscisic acid
GO:0010197Biological Processpolar nucleus fusion
GO:0010201Biological Processresponse to continuous far red light stimulus by the high-irradiance response system
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003677Molecular FunctionDNA binding
GO:0042803Molecular Functionprotein homodimerization activity
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 703 aa     Download sequence    Send to blast
MATYFQGNSD IQGTTNDGLQ TLILMNPSYV GFSDTQHHQS QQQQQGNNLV FFNSNHPGNS  60
MNLPHAPPPS QQQQQFVGIP LATTAFTAPS SSSSQEANTH SQHDISALHG FLARSQYGFY  120
NPANDITAAR ELTRAQQQGL SLSLSSRLGN FRPEREELVT SVSPTGGGGG SSSSASGVQS  180
VPLSSKYLKA AQELLDEVVN VGKAVKTSTE SAKGDDGKKS KDVGESSAAA AGDGQADGAA  240
ESSSKREGPE LSTAERQEIQ MKKAKLVNML DEVEQRYRHY HHQMQSVISW LEQAAGIGSA  300
KTYTALALQT ISKQFRCLKD AIIGQIRSAS KTLGEEDSLG GKIEGSRLKF VDNQIRQQRA  360
LQQLGMIQHN AWRPQRGLPE RAVSVLRAWL FEHFLHPYPK DSDKMMLAKQ TGLTRSQVSN  420
WFINARVRLW KPMVEEMYLE ETKEQEQNGS DHEKMSKGEQ NEDSTSRSIA PQEKSPGSDS  480
QNKSFISKQD NNLENHKPAS TIAMSNTTSI SPTGISIRNH SAFNLIGSSE LESFNITQGS  540
PKKPRSNEML HSPNSVPSIN MDVKHIEDRN EEQMTIKFGD DRQNRDGFPL MGGPTNFMGG  600
FGSYPIGEIG RFSTEQFSAP YSGSGTVSLT LGLPHSENLS MSATHHSFLP TDGIQLGRGV  660
EIGEANEFGL NTPTSAHSTS VYENFNIQNR KRFAAPLLPD FVA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3k2a_A2e-16378436563Homeobox protein Meis2
3k2a_B2e-16378436563Homeobox protein Meis2
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019250358.10.0PREDICTED: BEL1-like homeodomain protein 1
SwissprotQ9SJ561e-164BLH1_ARATH; BEL1-like homeodomain protein 1
TrEMBLA0A1J6I7N50.0A0A1J6I7N5_NICAT; Bel1-like homeodomain protein 1
STRINGXP_009787672.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA14782467
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35940.31e-143BEL1-like homeodomain 1
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]