PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00939g00022.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family GeBP
Protein Properties Length: 390aa    MW: 42709.7 Da    PI: 4.6822
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00939g00022.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57382.27.5e-2639134297
                    DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdq 86 
                               +f+r+w+e Dei +LqGl+d  + +++ +  d++ fy ++++s+s  ++ksql+eK+rrL+kKf+   ++ ++g ++++ ++hd+
  Peaxi162Scf00939g00022.1  39 KFHRIWTEPDEIRFLQGLLDGGSYENMWYPRDLNLFYTKFSNSMSQPYTKSQLSEKLRRLRKKFRVICARLDKGLDFKLLSPHDR 123
                               699***********************99999****************************************************** PP

                    DUF573  87 kifelskkiWg 97 
                                 ++lsk++W+
  Peaxi162Scf00939g00022.1 124 ALYDLSKQLWH 134
                               **********7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045041.8E-2740134IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 390 aa     Download sequence    Send to blast
MDSTYPFSPS SKLPIKRKTH QEPGSPTGSE QNPVQPPFKF HRIWTEPDEI RFLQGLLDGG  60
SYENMWYPRD LNLFYTKFSN SMSQPYTKSQ LSEKLRRLRK KFRVICARLD KGLDFKLLSP  120
HDRALYDLSK QLWHPDFAQS SPFNSDNKLK KSNLVGVKVS FLPAFLGPGQ GPNSGTHDGV  180
SVSEEDVGVE VGLLPALPGP GQGPNSGTHD GFLVSEEDVG VEVGLLPTLP GLVQGPDQGP  240
DGGRVTGKGV ADDGVSVIEK ENVEVEEDKN VNNDGGGDGE LGDEDGMLRE VNVELDRGDM  300
GEKGIGGSFS DGPVKVGEGF GIGEIAAKVV VDVFDECLKD FRNGGRSNLG GVLEEQSLDK  360
FEERWREQRV AELDVMARRM RLVLEHSLQS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11519KRKTH
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009797633.11e-134PREDICTED: uncharacterized protein LOC104244032
RefseqXP_016496498.11e-134PREDICTED: uncharacterized protein LOC107815434
TrEMBLA0A1S4C5X91e-133A0A1S4C5X9_TOBAC; uncharacterized protein LOC107815434
TrEMBLA0A1U7Y3C51e-133A0A1U7Y3C5_NICSY; uncharacterized protein LOC104244032
STRINGXP_009797633.11e-134(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA128221921
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28040.13e-18DNA-binding storekeeper protein-related transcriptional regulator