PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00955g00321.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family WRKY
Protein Properties Length: 458aa    MW: 49490.3 Da    PI: 6.2976
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00955g00321.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY99.22.6e-31249306260
                               --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
                      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                               +DgynWrKYGqK vkgsefprsYY+Ct+++C+vkk  ers  +++++ei+Y+g+H+h+k
  Peaxi162Scf00955g00321.1 249 EDGYNWRKYGQKLVKGSEFPRSYYKCTYPNCEVKKIFERSP-EGQITEIVYKGSHDHPK 306
                               7****************************************.***************85 PP
2WRKY34.44.4e-11420441122
                               ---SS-EEEEEEE--TT-SS-E CS
                      WRKY   1 ldDgynWrKYGqKevkgsefpr 22 
                               ldDgy+WrKYGqK+v+g+++pr
  Peaxi162Scf00955g00321.1 420 LDDGYRWRKYGQKVVRGNPNPR 441
                               59*******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.9E-26238307IPR003657WRKY domain
PROSITE profilePS5081121.758243307IPR003657WRKY domain
SuperFamilySSF1182903.27E-24246307IPR003657WRKY domain
SMARTSM007746.2E-33248306IPR003657WRKY domain
PfamPF031069.1E-24249305IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.9E-13405441IPR003657WRKY domain
SuperFamilySSF1182903.27E-9412442IPR003657WRKY domain
PROSITE profilePS5081115.698415451IPR003657WRKY domain
SMARTSM007745.4E-5420453IPR003657WRKY domain
PfamPF031061.8E-6421441IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 458 aa     Download sequence    Send to blast
MEEDSQSQSN QHQHQHHYTH SSSLNEQVLK STTSGASAVF VSGAAVGAKY KLMSPAKLPI  60
SRSACITIPP GLSPSSFLES PVLLSNVKAE PSPTTGSFSK FQLMQGSSRS AAFSMMRSCS  120
SGNAYGETTG EFEFKFATGS GSTSGSLTAE AAISAGLNQQ QSESLNQDQD RCLSQSSASS  180
ALDKNEMPNS KEPSLPAPVS LDASSISTAA AAAAIDTEEN QRGHSNPSSQ GSHTDNKDVS  240
TITVERSSED GYNWRKYGQK LVKGSEFPRS YYKCTYPNCE VKKIFERSPE GQITEIVYKG  300
SHDHPKPQPS RRFTPGALTS IQEDRGEKEA CFNGQEDKFN TNGLTSNIEP SSTPLSPRPA  360
DDDGLEGTAS QLHSTNDQMD EDDPFAKRRK LDGGMDITPV VKPIREPRVV VQTVSEVDIL  420
DDGYRWRKYG QKVVRGNPNP RYGKHSMVSN GNSGNPNP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A1e-152493071877Probable WRKY transcription factor 4
2lex_A1e-152493071877Probable WRKY transcription factor 4
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. {ECO:0000250|UniProtKB:Q9SI37}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB7111310.0AB711131.1 Nicotiana benthamiana NbWRKY10 mRNA for transcription factor, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009790875.10.0PREDICTED: probable WRKY transcription factor 20 isoform X1
SwissprotQ93WV01e-108WRK20_ARATH; Probable WRKY transcription factor 20
TrEMBLA0A1U7XWK30.0A0A1U7XWK3_NICSY; probable WRKY transcription factor 20 isoform X1
STRINGXP_009790875.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA40252344
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26640.13e-81WRKY family protein