PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00956g00016.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family Trihelix
Protein Properties Length: 352aa    MW: 39803.8 Da    PI: 8.2722
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00956g00016.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix53.46.8e-1725107275
                  trihelix   2 WtkqevlaLiearremeerlr.rgk........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtses 75 
                               Wt qe+++Liea++ ++er + +g+          + +W++v +++++ g+ rs++qC++kw+nl +++kk++e ek+ ++e+
  Peaxi162Scf00956g00016.1  25 WTIQETMVLIEAKKMDDERRSmKGNnergsnkpGGELRWKWVEDYCWKNGCLRSQNQCNDKWDNLMRDFKKVREYEKRVAEET 107
                               *************976666663232344444446789***************************************9986655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500907.0041790IPR017877Myb-like domain
PfamPF138371.1E-1024101No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 352 aa     Download sequence    Send to blast
MDHRVVVSNQ SGGSNMLRDY RKGNWTIQET MVLIEAKKMD DERRSMKGNN ERGSNKPGGE  60
LRWKWVEDYC WKNGCLRSQN QCNDKWDNLM RDFKKVREYE KRVAEETGKQ DGNVQEMLLL  120
KSYWKMERNE RKEKNLPTNM LPEIYEALVQ VVDRKCQKTL VVSTGGTFIN PIGTSLTTSL  180
SPTLQQQSIQ SQSSPLSLPP PPTLPLSPSP AIAQQPAAQP SNFPYNIQPL PTMCDSSDHD  240
KSEHSDSPAK RRRKGDQGEG TSGNNNINSL QEVGSAICKS ASIIAETMQA CEEREERRHR  300
ELLDLHERRL QIEESKAEIN RQGINGLVDS INRLANSILS LAGSKNQEAP PK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009614093.11e-160PREDICTED: trihelix transcription factor ASR3-like isoform X1
RefseqXP_016501444.11e-160PREDICTED: trihelix transcription factor ASR3-like
TrEMBLA0A1S4CKL31e-159A0A1S4CKL3_TOBAC; trihelix transcription factor ASR3-like
STRINGXP_009614093.11e-160(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA48212236
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35640.16e-55Trihelix family protein