PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00957g00330.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family MYB
Protein Properties Length: 246aa    MW: 28056.8 Da    PI: 8.5961
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00957g00330.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.12e-082463340
                              SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHH CS
           Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqc 40
                               WT+eE +++  a + +  +   +W++I+++++ g++  ++
  Peaxi162Scf00957g00330.1 24 EWTKEENKRFESALAIYDEKtpnRWSKISAMIP-GKSVLDV 63
                              7********************************.*998776 PP
2Myb_DNA-binding414.5e-13121165347
                               SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
           Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                               +WT+eE+ +++ + +++G+g+W+ I++ +   +t+ q+ s+ qky
  Peaxi162Scf00957g00330.1 121 PWTEEEHRRFLMGLEKYGKGDWRNISKNFVISKTPTQVASHAQKY 165
                               8*****************************789***********9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.4E-41767IPR009057Homeodomain-like
PROSITE profilePS512937.1672074IPR017884SANT domain
SMARTSM007171.3E-102173IPR001005SANT/Myb domain
SuperFamilySSF466891.24E-112377IPR009057Homeodomain-like
CDDcd001678.03E-82471No hitNo description
PfamPF002496.7E-72467IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.602.3E-12111168IPR009057Homeodomain-like
PROSITE profilePS5129419.506114170IPR017930Myb domain
SuperFamilySSF466891.17E-16115169IPR009057Homeodomain-like
TIGRFAMsTIGR015572.5E-18117169IPR006447Myb domain, plants
SMARTSM007179.1E-12118168IPR001005SANT/Myb domain
PfamPF002499.3E-12121165IPR001005SANT/Myb domain
CDDcd001671.36E-9121165No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    Send to blast
METLFPTTFL PNSSWMMQES KSTEWTKEEN KRFESALAIY DEKTPNRWSK ISAMIPGKSV  60
LDVMMQYKEL VADVSDIEAG LDPIPRHFAS SFTLDFVDDR RINSLRKRSR SCDQERKKGV  120
PWTEEEHRRF LMGLEKYGKG DWRNISKNFV ISKTPTQVAS HAQKYYLRQL SGGKDKKRPS  180
IHDITTVDLT DNVLLNNNKS MCEEKSCTAS QLQKSTSTAD VLTGCWINSN DGGLMAFSSL  240
YGSSIL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1105117RKRSRSCDQERKK
Functional Description ? help Back to Top
Source Description
UniProtInvolved in the dorsovental asymmetry of flowers. Promotes ventral identity. {ECO:0000269|PubMed:11937495, ECO:0000269|PubMed:9118809}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019241357.11e-145PREDICTED: transcription factor DIVARICATA-like isoform X2
SwissprotQ8S9H78e-84DIV_ANTMA; Transcription factor DIVARICATA
TrEMBLA0A1J6JSM61e-144A0A1J6JSM6_NICAT; Transcription factor myb1r1
STRINGXP_009776702.11e-143(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA45824140
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38090.14e-84MYB family protein
Publications ? help Back to Top
  1. Galego L,Almeida J
    Role of DIVARICATA in the control of dorsoventral asymmetry in Antirrhinum flowers.
    Genes Dev., 2002. 16(7): p. 880-91
    [PMID:11937495]
  2. Almeida J,Rocheta M,Galego L
    Genetic control of flower shape in Antirrhinum majus.
    Development, 1997. 124(7): p. 1387-92
    [PMID:9118809]