PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00961g00117.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family bHLH
Protein Properties Length: 241aa    MW: 26879.5 Da    PI: 6.0452
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00961g00117.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.13.1e-1398145355
                               HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                       HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                               + h ++Er+RR+++ + f  L +++P +     kKl+K++iL  +++Y+k+Lq
  Peaxi162Scf00961g00117.1  98 QDHVAAERNRREKMSQLFISLSKIVPGL-----KKLDKSSILGDTIDYMKELQ 145
                               6799************************.....9******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.43495144IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000107.7E-1198145IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.4E-1699158IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.18E-12100149No hitNo description
SuperFamilySSF474591.57E-16100156IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.9E-14101150IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    Send to blast
MARMLNKGMA YTGFNQEDLK QNLSYTIEEK AQKAISYSPL ISSSGLLISF GSSSLNPAVI  60
SEEDDIASMI KYSHLEESAY QESGGNNIIY KRTPLQAQDH VAAERNRREK MSQLFISLSK  120
IVPGLKKLDK SSILGDTIDY MKELQEQVKV LEETKKNIPS AWENNDSSSS KENVNGSNQV  180
VGSNIKARIS NKSVLINIHC NKEDGMVERV LSQMEQLHLA VHDIRIMPFG LTNLDISILA  240
E
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009768662.13e-89PREDICTED: transcription factor bHLH18-like
RefseqXP_016472308.13e-89PREDICTED: transcription factor bHLH18-like
TrEMBLA0A1S4A6N77e-88A0A1S4A6N7_TOBAC; transcription factor bHLH18-like
TrEMBLA0A1U7VKZ07e-88A0A1U7VKZ0_NICSY; transcription factor bHLH18-like
STRINGXP_009768662.11e-88(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA88641628
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.12e-30bHLH family protein