PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00979g00024.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family bHLH
Protein Properties Length: 253aa    MW: 27889.8 Da    PI: 10.084
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00979g00024.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.23.8e-1068113454
                               HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                       HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                               +h ++Er+RR+riN  +++L++l P +     +K +K+ +L++Av  +k+L
  Peaxi162Scf00979g00024.1  68 THAMAERKRRERINAHLHTLKKLFPYL-----PKKDKSRVLTEAVTQLKEL 113
                               79************************8.....699**********999887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.02E-1256122IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088813.38964113IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.56E-867118No hitNo description
Gene3DG3DSA:4.10.280.104.0E-1168123IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.2E-768113IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003536.0E-870119IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:3.30.70.2606.7E-5169234No hitNo description
CDDcd048730.00325169233No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    Send to blast
MISSLQGCDG FLQRTNSLQL LQKKNGSGNG HKYYSSSHTM ANNSTSTSAD ENAKSTRKSN  60
KSKDAAWTHA MAERKRRERI NAHLHTLKKL FPYLPKKDKS RVLTEAVTQL KELRKKVAQQ  120
LETKKDDKGG CCSNNEFSSL FLPSETDEVA VSYYEGSSVN EGQLMVKATV CCEDRPALNR  180
DLSMAVSSVQ GRVIKAEMAT VGCRTKAELV VVLCKENGGE RDIAQLRRAL RAVVENRALG  240
LGSSVVLGRR FGC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17277ERKRRE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019265405.11e-111PREDICTED: putative transcription factor bHLH107
TrEMBLA0A314L2641e-110A0A314L264_NICAT; Transcription factor bhlh30
STRINGXP_009779545.11e-110(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA137131315
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56770.15e-27bHLH family protein