PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00983g00005.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family GeBP
Protein Properties Length: 206aa    MW: 24116.8 Da    PI: 10.6756
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00983g00005.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57338.82.7e-1234109397
                    DUF573   3 fqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqk 87 
                               ++r+++e+Dei lL++l++  +++          f +      + +++++q+++K+ rLK++++k  ++     + +++++hdqk
  Peaxi162Scf00983g00005.1  34 PHRIFTENDEIQLLKALLKSPTNNS---------FTS-----QNGNFTETQITKKVTRLKERYHKLARN-----KSRIKTPHDQK 99 
                               68****************8744433.........333.....3457899***************99998.....7799******* PP

                    DUF573  88 ifelskkiWg 97 
                               i+e+ +kiWg
  Peaxi162Scf00983g00005.1 100 IYEIGRKIWG 109
                               *********8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045043.5E-1235109IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    Send to blast
MTTPRKQPIP AMNHRRSSPR SPKNPTTTSK SPEPHRIFTE NDEIQLLKAL LKSPTNNSFT  60
SQNGNFTETQ ITKKVTRLKE RYHKLARNKS RIKTPHDQKI YEIGRKIWGR KASKEKEQEL  120
HEVSKKEDVK LEDFPFLVSE MNKVFTRSEY CNEGLKRLGK EKLKSMNEKW MQLRLEESKL  180
MVNMAKLNHE NLKLVVESLK GESSNV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009592165.14e-84PREDICTED: probable transcription factor At1g61730
TrEMBLA0A1J6L2S04e-79A0A1J6L2S0_NICAT; Uncharacterized protein
STRINGXP_009592165.11e-83(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1363478
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04930.26e-08DNA-binding storekeeper protein-related transcriptional regulator