PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00991g00337.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family C2H2
Protein Properties Length: 394aa    MW: 45536.4 Da    PI: 8.6106
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00991g00337.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H217.79.9e-0684108123
                               EEET..TTTEEESSHHHHHHHHHHT CS
                   zf-C2H2   1 ykCp..dCgksFsrksnLkrHirtH 23 
                               ++C+  dC  s++rk++L+rH+  H
  Peaxi162Scf00991g00337.1  84 FVCHvdDCQSSYRRKDHLTRHLLQH 108
                               89*******************9887 PP
2zf-C2H212.30.00053113138123
                               EEET..TTTEEESSHHHHHHHHHH.T CS
                   zf-C2H2   1 ykCp..dCgksFsrksnLkrHirt.H 23 
                               +kCp   C+  Fs + n+ +H ++ H
  Peaxi162Scf00991g00337.1 113 FKCPvdGCKSAFSFQGNMSQHVKKiH 138
                               89*********************999 PP
3zf-C2H221.46.5e-07152176123
                               EEET..TTTEEESSHHHHHHHHHHT CS
                   zf-C2H2   1 ykCp..dCgksFsrksnLkrHirtH 23 
                               y+Cp   Cgk+F+  s L++H  +H
  Peaxi162Scf00991g00337.1 152 YVCPeaGCGKVFKYASKLRKHEDSH 176
                               9********************9888 PP
4zf-C2H220.21.6e-06272296223
                               EET..TTTEEESSHHHHHHHHHH.T CS
                   zf-C2H2   2 kCp..dCgksFsrksnLkrHirt.H 23 
                               kC+  dC  +Fs++snL++Hi+  H
  Peaxi162Scf00991g00337.1 272 KCEfkDCQHTFSTRSNLVQHIKAaH 296
                               69999****************9888 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003551001537IPR015880Zinc finger, C2H2-like
SuperFamilySSF576671.72E-675110No hitNo description
Gene3DG3DSA:3.30.160.601.5E-981110IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PROSITE profilePS501579.41184113IPR007087Zinc finger, C2H2
SMARTSM003550.03584108IPR015880Zinc finger, C2H2-like
PROSITE patternPS00028086108IPR007087Zinc finger, C2H2
Gene3DG3DSA:3.30.160.601.3E-5111139IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
SuperFamilySSF576673.66E-5111139No hitNo description
SMARTSM003550.012113138IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.141113138IPR007087Zinc finger, C2H2
PROSITE patternPS000280115138IPR007087Zinc finger, C2H2
Gene3DG3DSA:3.30.160.605.2E-9149178IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
SuperFamilySSF576676.57E-5150176No hitNo description
PROSITE profilePS5015710.97152181IPR007087Zinc finger, C2H2
SMARTSM003554.3E-4152176IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280154176IPR007087Zinc finger, C2H2
SMARTSM003559.3213238IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280215238IPR007087Zinc finger, C2H2
SMARTSM0035513241262IPR015880Zinc finger, C2H2-like
Gene3DG3DSA:3.30.160.608.8E-6252293IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
SuperFamilySSF576672.07E-9253309No hitNo description
SMARTSM003550.0033271296IPR015880Zinc finger, C2H2-like
PROSITE profilePS5015713.214271301IPR007087Zinc finger, C2H2
PROSITE patternPS000280273296IPR007087Zinc finger, C2H2
Gene3DG3DSA:3.30.160.603.3E-5295324IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
SMARTSM0035511302328IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280304328IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 394 aa     Download sequence    Send to blast
MGEEEEVKKR DIRRYYCEYC GICRSKKSLI SCHILSHHQD EFERRKDEGN EDANVKEGPK  60
MNTCEECGIE VMREILWNYV KRPFVCHVDD CQSSYRRKDH LTRHLLQHQG KLFKCPVDGC  120
KSAFSFQGNM SQHVKKIHDP SVSPKVDPPK QYVCPEAGCG KVFKYASKLR KHEDSHGKSN  180
LKILIFLLLC VLKTSNNIKL PCIYAVKLET VEALCLEPGC MKHFTNEKCL KEHINTCHQH  240
IVCEICGTKQ LKKNIKRHLR THEEGPTSER VKCEFKDCQH TFSTRSNLVQ HIKAAHLGDK  300
PFSCGIPGCG MKFAFKHVRD RHEKSGCHVY TPGDFVEADE QFRSRPRGGR KRKLPVFEDI  360
MRKRITPPSG TDRVFNQGSE YLSWLLSVES DDEL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1344352RPRGGRKRK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016453639.10.0PREDICTED: transcription factor IIIA-like isoform X2
TrEMBLA0A1S3YMZ90.0A0A1S3YMZ9_TOBAC; transcription factor IIIA-like isoform X2
STRINGXP_009592258.10.0(Nicotiana tomentosiformis)
STRINGXP_009622481.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA36442447
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72050.11e-104transcription factor IIIA