PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peaxi162Scf00995g00034.1

Organism

Petunia axillaris

Taxonomic ID

33119

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia

Family

MYB_related

Protein Properties

Length: 245aa MW: 27867.3 Da PI: 7.3018

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peaxi162Scf00995g00034.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	30.5	8.5e-10	32	77	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++WT++E+ l++++ k +G+g W++I++ t+ q+ + qky Peaxi162Scf00995g00034.1 32 NPWTEDEHRLFLRGMKIHGKGKWTKISKDCLPSGTPQQIACHAQKY 77 69*************************9654355888888888887 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51294	14.947	26	82	IPR017930	Myb domain
Gene3D	G3DSA:1.10.10.60	6.4E-10	27	77	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	6.8E-11	29	80	IPR006447	Myb domain, plants
SuperFamily	SSF46689	9.72E-13	29	82	IPR009057	Homeodomain-like
SMART	SM00717	1.4E-6	30	80	IPR001005	SANT/Myb domain
Pfam	PF00249	1.2E-7	32	77	IPR001005	SANT/Myb domain
CDD	cd00167	5.51E-8	33	78	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 245 aa Download sequence Send to blast
MGRISEKNKK IKLFGVDTKN SENYGRKIKK SNPWTEDEHR LFLRGMKIHG KGKWTKISKD 60 CLPSGTPQQI ACHAQKYFIR LTETNERRRR NKPSVFDVNL ENTEEISEEN SNVVSEHAIV 120 PLKNQEHYDN TVSLENQEHN DANIVQLENQ EHDANIVPLK NQEQREDHQE TASALLVTPI 180 AAIPTETSQH PSFLIPSYSM VQLSTVGGTR VVLPITWVQM YNGINYGTLV QQPLSSYCSS 240 NLTLG

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA7454	12	30

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10580.2	1e-16	MYB_related family protein