PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peaxi162Scf01086g00036.1

Organism

Petunia axillaris

Taxonomic ID

33119

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia

Family

GeBP

Protein Properties

Length: 819aa MW: 94932 Da PI: 4.0058

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peaxi162Scf01086g00036.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	33.8	9.6e-11	727	811	12	97
DUF573 12 eivlLqGlidfkaktgkspsddidafyefvkksi.sfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskki 95 ++++L+ + f ++g ps +++++ + +si ++kv ++l++Ki L +Kfk+ ++ +g++p++ ++ d++if ls++i Peaxi162Scf01086g00036.1 727 DLAILKSISHFYYSNGYVPSPSSNELHNHIMDSIpNLKVLGEELINKIVTLEDKFKTVREL--DGDNPDMPRPVDREIFVLSMSI 809 689****************************9558******************99..******************** PP DUF573 96 Wg 97 W+ Peaxi162Scf01086g00036.1 810 WE 811 *7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04504	3.0E-7	727	811	IPR007592	Protein of unknown function DUF573

Sequence ? help Back to Top
Protein Sequence Length: 819 aa Download sequence Send to blast
MEPAESSSSS KFPSPPQEHH YIDNNIQDEE LTPAFDVEDL ICTEQFDQIM ENEVQEVVIS 60 DASSTNSTMD ERKGLSFGDE AVSSATKVHR VKCISCDEAE GEVVQDMKMN EKEEKEQGHN 120 ESKDDYGNQE SEQRESGDQE SDQNDGEEDR NQEDSNEEEE DEDKKEDEDD DEGENRNQEN 180 NEEEEEEDEE IEDETEEEAE EGEKEESQPV VEGKQQEPDD EKGRSTRKRL FSELYESQTR 240 TEEEGQEKMA EDTEGEKHND QQEHTENNAE REDHDNNQSS EEQADNGNQE SEQNEGNEDE 300 VQEEEEVEDE EEEKRKAIAK GKRPQICKLA FVVRKYSNLQ RGETSYKAEE EAIDNRQKEE 360 VNQDSHEDEQ DLVILKAISH FYYSNGYAPS PSSIELHKHI KNSIPSLTIR GEELTTKIGT 420 LEDQFRTVKD LDGDNPDLPR PIDREIFDLS MRAENENQES DQNEGEEDDG EHDENRDNED 480 EEEEQQVEDE EEKRKAIAKG KRPMSEICKL EFIVPKFSTN LQSGETSRAE DDAEDNPPEE 540 ELNQDNHDDV QDLAILKSIS HFFYSNGYVP YPSSDVLHNH IMDSVPKLRI LGEDLVNRIV 600 TLEDNFRTVW ALDIDNPDMP RPIDREIFDL STSIWNERGK IYGNQESEQR EKGEQGDQES 660 EKYEKEEEDN NQEEDEKRKA IKKGKRPVPK YSKFVYGETS YRAEEETKNN SPKDDELNQD 720 NNDDFQDLAI LKSISHFYYS NGYVPSPSSN ELHNHIMDSI PNLKVLGEEL INKIVTLEDK 780 FKTVRELDGD NPDMPRPVDR EIFVLSMSIW ERRNKNKYS

Sequence ? help Back to Top

Protein Sequence Length: 819 aa Download sequence Send to blast

MEPAESSSSS KFPSPPQEHH YIDNNIQDEE LTPAFDVEDL ICTEQFDQIM ENEVQEVVIS  60
DASSTNSTMD ERKGLSFGDE AVSSATKVHR VKCISCDEAE GEVVQDMKMN EKEEKEQGHN  120
ESKDDYGNQE SEQRESGDQE SDQNDGEEDR NQEDSNEEEE DEDKKEDEDD DEGENRNQEN  180
NEEEEEEDEE IEDETEEEAE EGEKEESQPV VEGKQQEPDD EKGRSTRKRL FSELYESQTR  240
TEEEGQEKMA EDTEGEKHND QQEHTENNAE REDHDNNQSS EEQADNGNQE SEQNEGNEDE  300
VQEEEEVEDE EEEKRKAIAK GKRPQICKLA FVVRKYSNLQ RGETSYKAEE EAIDNRQKEE  360
VNQDSHEDEQ DLVILKAISH FYYSNGYAPS PSSIELHKHI KNSIPSLTIR GEELTTKIGT  420
LEDQFRTVKD LDGDNPDLPR PIDREIFDLS MRAENENQES DQNEGEEDDG EHDENRDNED  480
EEEEQQVEDE EEKRKAIAKG KRPMSEICKL EFIVPKFSTN LQSGETSRAE DDAEDNPPEE  540
ELNQDNHDDV QDLAILKSIS HFFYSNGYVP YPSSDVLHNH IMDSVPKLRI LGEDLVNRIV  600
TLEDNFRTVW ALDIDNPDMP RPIDREIFDL STSIWNERGK IYGNQESEQR EKGEQGDQES  660
EKYEKEEEDN NQEEDEKRKA IKKGKRPVPK YSKFVYGETS YRAEEETKNN SPKDDELNQD  720
NNDDFQDLAI LKSISHFYYS NGYVPSPSSN ELHNHIMDSI PNLKVLGEEL INKIVTLEDK  780
FKTVRELDGD NPDMPRPVDR EIFVLSMSIW ERRNKNKYS

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016453452.1	9e-48	PREDICTED: protein PFC0760c-like

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA5014	3	7