PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf01099g00011.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family ERF
Protein Properties Length: 158aa    MW: 17918.6 Da    PI: 9.1449
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf01099g00011.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2643.2e-201464155
                       AP2  1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                              ++++GVr ++ +gr++AeIrd ++    ++r +lg+f+t eeAa a+++a+++l+g
  Peaxi162Scf01099g00011.1 14 CHFRGVRKRP-WGRYAAEIRDpWK----KTRRWLGTFDTVEEAALAYDEAARSLRG 64
                              689*******.**********883....5999**********************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000184.81E-301472No hitNo description
PfamPF008473.1E-131464IPR001471AP2/ERF domain
SMARTSM003801.7E-331578IPR001471AP2/ERF domain
PROSITE profilePS5103221.721572IPR001471AP2/ERF domain
SuperFamilySSF541718.5E-221573IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.102.8E-301572IPR001471AP2/ERF domain
PRINTSPR003671.8E-91627IPR001471AP2/ERF domain
PRINTSPR003671.8E-93854IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 158 aa     Download sequence    Send to blast
MCGSLQTVRT FKECHFRGVR KRPWGRYAAE IRDPWKKTRR WLGTFDTVEE AALAYDEAAR  60
SLRGPKAKTN FELDPIATGP IAPPLSLMKP AFGPETLPHW CFQAFYGSGL EHKSTVATSE  120
YIGYKIEGVG VVMNEHEKKI ESEKKPFLFD LNLPAPLF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A1e-191273264ATERF1
3gcc_A1e-191273264ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027095564.18e-66ethylene-responsive transcription factor 12-like
TrEMBLA0A068U5A22e-64A0A068U5A2_COFCA; Uncharacterized protein
STRINGXP_009788813.17e-65(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA141361212
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28360.13e-32ERF domain protein 12