PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf01099g00015.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family WRKY
Protein Properties Length: 364aa    MW: 40793.3 Da    PI: 10.1456
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf01099g00015.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY99.52.1e-31298355359
                               -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                      WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                               D+y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ e+p+++++tYegeHnh+
  Peaxi162Scf01099g00015.1 298 DEYSWRKYGQKPIKGSPHPRGYYKCSSMrGCPARKHVERCLEEPSMLIVTYEGEHNHP 355
                               9************************9988****************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF105334.7E-8275294IPR018872Zn-cluster domain
Gene3DG3DSA:2.20.25.801.3E-33284356IPR003657WRKY domain
PROSITE profilePS5081129.884291357IPR003657WRKY domain
SuperFamilySSF1182904.97E-27294356IPR003657WRKY domain
SMARTSM007749.4E-39296356IPR003657WRKY domain
PfamPF031062.6E-27298355IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005516Molecular Functioncalmodulin binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 364 aa     Download sequence    Send to blast
MEEIEEANRV AVESCHRVVS LLSQQPNDQK QYGNLVRETG EAVHKFNKVV TLLNSSLGHA  60
RVRKAKKIIT PFPQNLLLEN PSCKIDHQPK ALQLMPDNPV LESGSNVKST LSLGTPSLEL  120
GSHSKNPLHL AQQTPVPSYH FLQQQQQLQQ QRRYQLQQQQ LKQQADITYR RSNSGISLNF  180
DSSTCTPTMS STRSFISSLS IDGSVANMDG NSFHLIGASR SADQSSFQHK RRCSGRGEDG  240
SVKCGSSGRC HCSKKRSIVL MHYMYLQPSG LSLNRKHRVK RSIKVPAISN KLADIPPDEY  300
SWRKYGQKPI KGSPHPRGYY KCSSMRGCPA RKHVERCLEE PSMLIVTYEG EHNHPRLPSQ  360
SANA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A5e-20289358775WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00284DAPTransfer from AT2G30590Download
Motif logo
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By salicylic acid. {ECO:0000269|PubMed:11449049}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754486e-94HG975448.1 Solanum pennellii chromosome ch09, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009618397.10.0PREDICTED: probable WRKY transcription factor 21
RefseqXP_016477430.10.0PREDICTED: probable WRKY transcription factor 21
SwissprotO043361e-117WRK21_ARATH; Probable WRKY transcription factor 21
TrEMBLA0A1S4ALF00.0A0A1S4ALF0_TOBAC; probable WRKY transcription factor 21
STRINGXP_009618397.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA32712350
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G30590.11e-110WRKY DNA-binding protein 21