PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf01128g00001.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family C2H2
Protein Properties Length: 282aa    MW: 31373.9 Da    PI: 7.4525
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf01128g00001.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.30.0011105127123
                               EEETTTTEEESSHHHHHHHHHHT CS
                   zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                               y+C+ C+++F++   L  H  +H
  Peaxi162Scf01128g00001.1 105 YQCKTCNRCFPSFQALGGHRASH 127
                               9***********99999998887 PP
2zf-C2H213.40.00022191213123
                               EEETTTTEEESSHHHHHHHHHHT CS
                   zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                               ++C++Cg  F++   L  H+r+H
  Peaxi162Scf01128g00001.1 191 HECSICGAEFTSGQALGGHMRRH 213
                               78********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576671.74E-8104127No hitNo description
PfamPF139128.3E-11104129IPR007087Zinc finger, C2H2
PROSITE profilePS501579.972105132IPR007087Zinc finger, C2H2
SMARTSM003550.08105127IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280107127IPR007087Zinc finger, C2H2
SuperFamilySSF576671.74E-8186213No hitNo description
PfamPF139129.3E-13190214IPR007087Zinc finger, C2H2
SMARTSM003550.01191213IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.723191213IPR007087Zinc finger, C2H2
PROSITE patternPS000280193213IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    Send to blast
MEVQMQEDHD HHMNMVIKRR RTKRPRPSSP LALTIATSSC STVEGTHAGE LDGHVANSSS  60
SPSNSGIDIL IRNREEEDMA NCLILLAQGH NNQKPSPSHS PLDVYQCKTC NRCFPSFQAL  120
GGHRASHKKP KLPTNLEEKN SKPIEHVENC SKSNEDHVTT LSLQISNNNI NNNNSNNNNN  180
NNIIKNKNRV HECSICGAEF TSGQALGGHM RRHRPLPNSI AIASTSHELE SSHEIKNTRN  240
FLSLDLNLPA PEDDHRPETK FSFASKEQVI VFSASPLVDC HY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12226KRPRP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB0065980.0AB006598.1 Petunia x hybrida mRNA for ZPT2-11, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009782985.11e-126PREDICTED: zinc finger protein ZAT5-like
RefseqXP_016507626.11e-126PREDICTED: zinc finger protein ZAT5-like
TrEMBLO220830.0O22083_PETHY; ZPT2-11
STRINGXP_009782985.11e-125(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12622480
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28200.12e-51C2H2 family protein