PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peaxi162Scf01178g00113.1

Organism

Petunia axillaris

Taxonomic ID

33119

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia

Family

bHLH

Protein Properties

Length: 239aa MW: 27401.1 Da PI: 7.8888

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peaxi162Scf01178g00113.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.9	3.1e-12	88	140	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 ++++h e+Er+RR+++ + ++ Lr+ lP + ++K s ++ +A +YI ++q Peaxi162Scf01178g00113.1 88 KKVMHREIERQRRQEMATLYASLRQQLPLEV--IKGKRSTSDHILEAANYIEHMQ 140 6899***********************64..******************99 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
CDD	cd00083	2.52E-9	85	144	No hit	No description
SuperFamily	SSF47459	6.02E-13	85	156	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profile	PS50888	12.601	87	139	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	2.2E-9	88	140	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	1.1E-8	89	157	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	0.0019	93	145	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 239 aa Download sequence Send to blast
MFPLQQQDDH NDPNQLLYPP PYANPSFMYQ QGAIQQQDLV IDFATFQSLE LDENTARFNN 60 NNDNNNKLPK SSSSASLQVE KITDDKQKKV MHREIERQRR QEMATLYASL RQQLPLEVIK 120 GKRSTSDHIL EAANYIEHMQ KNVKNLEEKR DKIKMKTSNS SNLDFCKSGS SSTIEPSSTI 180 VTMRQCLDGM EILFNCGLKN EEFRLSRVLK VLLQEGLSIV NCSCTKTKTS LLHTIRAEV

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009804982.1	1e-99	PREDICTED: transcription factor bHLH118-like
Refseq	XP_009804989.1	1e-99	PREDICTED: transcription factor bHLH118-like
Refseq	XP_016452590.1	1e-99	PREDICTED: transcription factor bHLH118-like
TrEMBL	A0A1S3YKF9	3e-98	A0A1S3YKF9_TOBAC; transcription factor bHLH118-like
TrEMBL	A0A1U7YLP6	3e-98	A0A1U7YLP6_NICSY; transcription factor bHLH118-like
STRING	XP_009804982.1	5e-99	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA598	24	109

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G51780.1	4e-35	bHLH family protein