PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf01178g00119.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family bHLH
Protein Properties Length: 254aa    MW: 28661 Da    PI: 9.0018
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf01178g00119.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.16.4e-1379129155
                               CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                       HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                               ++++h  +Er+RR+++ + ++ Lr+llP +     +K s ++   +Av+YIk+Lq
  Peaxi162Scf01178g00119.1  79 KKVMHRDIERQRRREMATLYSSLRSLLPLQ----YGKRSVSDHMHEAVNYIKQLQ 129
                               6899*************************7....5999****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000833.22E-876132No hitNo description
SuperFamilySSF474597.33E-1377146IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088813.73878128IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.1E-1079129IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.9E-1080144IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003530.004784134IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    Send to blast
MFPLQQSDEL LFQILSNDPC QQGKITQDLI VDYASLETSH SLNIKSTSRK RKLPRKVLGK  60
NLEKNEEITA SAATTPELKK VMHRDIERQR RREMATLYSS LRSLLPLQYG KRSVSDHMHE  120
AVNYIKQLQA NINDLERKRD KLKMLIPSSI SPRGSVENGS SDISSVSTDH CVIVSPCHGG  180
VEILITSNYR GKNLPLSRVL QELLKEGLDV VSCVSAQVNQ KLLHRIQSEA CDMKCINLHA  240
LQGKVMDVIN NDLY
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009587651.11e-115PREDICTED: transcription factor bHLH36-like
TrEMBLA0A1S4AYZ31e-112A0A1S4AYZ3_TOBAC; transcription factor bHLH118-like
STRINGXP_009587651.11e-114(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA59824109
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51790.12e-39bHLH family protein