PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf01231g00027.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family B3
Protein Properties Length: 217aa    MW: 24863.4 Da    PI: 4.8638
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf01231g00027.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3391.5e-121141713290
                               --SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
                        B3  32 esktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                               ++++ ++  + gr+W +kl+ ++ksgr  l kGW +Fv an+Lk gD v F+l++++ +
  Peaxi162Scf01231g00027.1 114 CEMKRVVVKLGGRQWYMKLS-TGKSGRKKLNKGWVDFVVANNLKIGDHVNFQLVESNAK 171
                               6778889999*********5.88888899***********************9865443 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.40.330.107.5E-1367175IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019361.1E-1369173IPR015300DNA-binding pseudobarrel domain
CDDcd100178.92E-1172180No hitNo description
SMARTSM010194.0E-574179IPR003340B3 DNA binding domain
PfamPF023622.2E-10114171IPR003340B3 DNA binding domain
PROSITE profilePS5086311.011125183IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    Send to blast
MAQLFALIEQ IVFQPQLSKR SLMEGPTCLN GYGNCSEQSL SLTTKVAKEK SILRASMAYG  60
NEESTPIDDS KRFFDSILSK SYIERDDFIP PLKIRQHLPV TEMLLSDVWR FLPCEMKRVV  120
VKLGGRQWYM KLSTGKSGRK KLNKGWVDFV VANNLKIGDH VNFQLVESNA KVVKFEFTMF  180
GHPDPDELEF SMSDSDDEPD NLPQVDEETP DDLVWLY
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31640.17e-06B3 family protein