PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peaxi162Scf01514g00020.1

Organism

Petunia axillaris

Taxonomic ID

33119

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia

Family

FAR1

Protein Properties

Length: 278aa MW: 32200.2 Da PI: 6.4286

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peaxi162Scf01514g00020.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	93.8	2.1e-29	43	132	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleH 85 +fYn+YA++vGFs+rk++ +++k+ g +t+r+ +C keg+r ++++k +++++r+etrtgC+a+++++++++gk+++tk+eleH Peaxi162Scf01514g00020.1 43 NFYNAYARRVGFSIRKEYVNTNKKLGYVTSRKITCFKEGFRGDDNRK-YQAKNPRKETRTGCQAHIVITRQSSGKYHITKVELEH 126 6****************************************9999.9******************************** PP FAR1 86 nHelap 91 nH+l+p Peaxi162Scf01514g00020.1 127 NHPLVP 132 *986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	1.8E-26	43	132	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 278 aa Download sequence Send to blast
MDNSGESMCE ITPEEILQSS FQEPIDFEPK LGHEFDSDES AVNFYNAYAR RVGFSIRKEY 60 VNTNKKLGYV TSRKITCFKE GFRGDDNRKY QAKNPRKETR TGCQAHIVIT RQSSGKYHIT 120 KVELEHNHPL VPPTMVHMLP SHRRINVAQS HEIDLAEDAG LFAKATFDFM SLQAGGRENL 180 GYTKLDHKNY LRTKRQKAMK QGEAGLLLEY FEKKRTEDPS FFFAVQLDID DMIINIFWAD 240 SKMILDYEIF GDVLSFDTTY QTNXKKIVTE ISYLELEI

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009799718.1	1e-138	PREDICTED: protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A314KN16	1e-149	A0A314KN16_NICAT; Protein far1-related sequence 5
STRING	XP_009799718.1	1e-137	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA3021	17	40

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-58	FAR1-related sequence 5