PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf02233g00008.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family WRKY
Protein Properties Length: 329aa    MW: 37172.6 Da    PI: 6.8331
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf02233g00008.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY742e-23129190159
                               ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
                      WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                               +dDg+ WrKYGqK++ + ++pr+YY+Ct +   gC ++k+v+r + +p  + ++Y+g+H+++
  Peaxi162Scf02233g00008.1 129 VDDGHVWRKYGQKQILDCPYPRNYYKCTNKfdqGCAATKQVQRIQANPPRFRTMYQGHHTCR 190
                               59**************************99999***************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.6E-24120190IPR003657WRKY domain
PROSITE profilePS5081121.207124187IPR003657WRKY domain
SuperFamilySSF1182905.75E-23125191IPR003657WRKY domain
SMARTSM007746.0E-33129191IPR003657WRKY domain
PfamPF031062.4E-22130190IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    Send to blast
MESSLWPENP LTHLKMLIKE LHCGQEFTNR LREVIKKPQG NGCTNTMFAE DLVEKIMGSF  60
CKTLSILNSN KFNEDSQVPV AISPRRKGGR TSPEDSTGSC KASSVKDGRG CNRKRRIPET  120
STKETSTLVD DGHVWRKYGQ KQILDCPYPR NYYKCTNKFD QGCAATKQVQ RIQANPPRFR  180
TMYQGHHTCR TYPTVSQILL EDSSTDDDSS VLLSFDSNVN YNHPYFPTFP SIKRETKEEV  240
SLSGIYSCNN QNQSSSTNYF ITSNDYLTPT DETPHGIIKA TLSSGSDNVN FISSGSVYDS  300
CCSTITSSMQ MEMDMLVMRS IDFEDFPFE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A7e-18129190869OsWRKY45
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016448472.11e-149PREDICTED: probable WRKY transcription factor 70
TrEMBLA0A1S3Y8U01e-148A0A1S3Y8U0_TOBAC; probable WRKY transcription factor 70
STRINGXP_009765461.11e-136(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA42302143
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.16e-32WRKY DNA-binding protein 70