PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peaxi162Scf37870g00003.1

Organism

Petunia axillaris

Taxonomic ID

33119

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia

Family

NAC

Protein Properties

Length: 351aa MW: 40138.4 Da PI: 4.1976

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peaxi162Scf37870g00003.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	38.2	4.4e-12	2	126	17	128
NAM 17 eyLkkkvegkkleleev.ikevdiykv.ePwdLpkkvka....eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 +yL +++++l+l++ ++ +d+y ePw++ +++k+ +++ y ++ +k +a +kr r++ +g+Wk++ k k++l++ Peaxi162Scf37870g00003.1 2 KYLLGFATNNPLPLQDElMQFADLYADkEPWQIFQACKSheciNKNARYIITQLKKVAAGKKRVARTVGKGTWKSQDKGKKLLDT 86 68888888999888777477779997559**753333234355677999999999999********************* PP NAM 96 kgelvglkktLvfy.......kgrapkgektdWvmheyrl 128 +g+l+g +t+ + + ++ + + +W+m ey+l Peaxi162Scf37870g00003.1 87 SGRLMGFVTTFKYNpnnnkknTTNNDNNDNGEWLMREYSL 126 *********9877654434555566999****97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51005	18.21	1	149	IPR003441	NAC domain
SuperFamily	SSF101941	6.02E-18	3	149	IPR003441	NAC domain
Pfam	PF02365	7.2E-6	30	126	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 351 aa Download sequence Send to blast
MKYLLGFATN NPLPLQDELM QFADLYADKE PWQIFQACKS HECINKNARY IITQLKKVAA 60 GKKRVARTVG KGTWKSQDKG KKLLDTSGRL MGFVTTFKYN PNNNKKNTTN NDNNDNGEWL 120 MREYSLADKY LDASQIKNKD FVICRIKKKE TKGDNIQEVN NDGDVEGDVE EYINSVLQED 180 HVQEVVNGQS NDIVLLTDHI EENNNNEYYV IDDEDNIQVV DSDGDVEGDV EEYINFVLQE 240 DHVQEDVNGQ LNDTVLPADH IEENNNNEYS MIEGDDIINV CDLFGSADQV QVQDHQLPIS 300 WGSEDYVDLD KQRDIVVSYW FFVNKSGATK LRLNMGFEIV STILIQVEAN L

Sequence ? help Back to Top

Protein Sequence Length: 351 aa Download sequence Send to blast

MKYLLGFATN NPLPLQDELM QFADLYADKE PWQIFQACKS HECINKNARY IITQLKKVAA  60
GKKRVARTVG KGTWKSQDKG KKLLDTSGRL MGFVTTFKYN PNNNKKNTTN NDNNDNGEWL  120
MREYSLADKY LDASQIKNKD FVICRIKKKE TKGDNIQEVN NDGDVEGDVE EYINSVLQED  180
HVQEVVNGQS NDIVLLTDHI EENNNNEYYV IDDEDNIQVV DSDGDVEGDV EEYINFVLQE  240
DHVQEDVNGQ LNDTVLPADH IEENNNNEYS MIEGDDIINV CDLFGSADQV QVQDHQLPIS  300
WGSEDYVDLD KQRDIVVSYW FFVNKSGATK LRLNMGFEIV STILIQVEAN L

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA1024	13	85