PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Ctg12677271g00001.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family MYB_related
Protein Properties Length: 62aa    MW: 7065 Da    PI: 10.8559
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Ctg12677271g00001.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding22.33.2e-073341647
                                 HHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
              Myb_DNA-binding 16 vkqlGggtWktIartmgkgRtlkqcksrwqky 47
                                  +++G+g+W+ I+r +   +t+ q+ s+ qky
  Peinf101Ctg12677271g00001.1  3 LEKHGKGDWRNISRNFVISKTPTQVASHAQKY 34
                                 68***************789***********9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129413.77139IPR017930Myb domain
TIGRFAMsTIGR015572.0E-9238IPR006447Myb domain, plants
SuperFamilySSF466895.66E-8238IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.0E-5234IPR009057Homeodomain-like
CDDcd001676.65E-5234No hitNo description
PfamPF002491.1E-5334IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 62 aa     Download sequence    Send to blast
MGLEKHGKGD WRNISRNFVI SKTPTQVASH AQKYYLRQLS GGKDKRRPSI HDITTVNLSN  60
ID
Functional Description ? help Back to Top
Source Description
UniProtInvolved in the dorsovental asymmetry of flowers. Promotes ventral identity. {ECO:0000269|PubMed:11937495, ECO:0000269|PubMed:9118809}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019267157.18e-37PREDICTED: transcription factor DIVARICATA-like
SwissprotQ8S9H77e-32DIV_ANTMA; Transcription factor DIVARICATA
TrEMBLA0A314KZ482e-35A0A314KZ48_NICAT; Transcription factor myb1r1
STRINGXP_009590398.16e-36(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1644955
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58900.16e-34Homeodomain-like transcriptional regulator
Publications ? help Back to Top
  1. Galego L,Almeida J
    Role of DIVARICATA in the control of dorsoventral asymmetry in Antirrhinum flowers.
    Genes Dev., 2002. 16(7): p. 880-91
    [PMID:11937495]
  2. Almeida J,Rocheta M,Galego L
    Genetic control of flower shape in Antirrhinum majus.
    Development, 1997. 124(7): p. 1387-92
    [PMID:9118809]