 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Peinf101Ctg13256536g00001.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
|
| Family |
M-type_MADS |
| Protein Properties |
Length: 215aa MW: 24349 Da PI: 4.3239 |
| Description |
M-type_MADS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Peinf101Ctg13256536g00001.1 | genome | SGN | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | SRF-TF | 24.6 | 3.3e-08 | 1 | 19 | 23 | 41 |
HHHHHHHHHT-EEEEEEE- CS
SRF-TF 23 KAeELSvLCdaevaviifs 41
KA+ELS+LCd++va++if
Peinf101Ctg13256536g00001.1 1 KAQELSTLCDVKVAIVIFK 19
9****************95 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 215 aa
Download sequence Send
to blast |
KAQELSTLCD VKVAIVIFKN GENTPIVWPS QAVGEEIART FRNTDEVQKI KKLVKHENYL 60
LEKLQDRAEN FWKKTEEIEM ELLFNQLVEG KNINELDARQ IKGLKKLFDI KKAKVAERKK 120
QLNEEKQLNE DNEKNEDVQP IQDQPDQPSD QPQSPLPDKN IGEASTSSLE LLTNNQPFLE 180
AMATNQDFGL GVESGTSSGP QEAGKDNDAE EENDD
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | FJ168509 | 0.0 | FJ168509.1 Petunia x hybrida type I MADS box transcription factor (MADSy4) gene, complete cds. |
