PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Ctg13287258g00002.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family bHLH
Protein Properties Length: 115aa    MW: 12750.7 Da    PI: 6.2493
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Ctg13287258g00002.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.80.000231183855
                                 STCHHHHHHHHHHHHHHH CS
                          HLH 38 lsKaeiLekAveYIksLq 55
                                 l+K++iL  ++eY+k+Lq
  Peinf101Ctg13287258g00002.1  1 LDKSSILGDTIEYMKELQ 18
                                 79***************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.44E-5135IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.107.4E-6129IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 115 aa     Download sequence    Send to blast
LDKSSILGDT IEYMKELQEQ VKVLEEIKQK IPSPCQKSGS SSSSKESVNG SNQVVGSNIK  60
ARISNKSVLI NIHCNKEDGM VERVLSQMEQ LHLAVHDIRI MPFGLMNLDI SILAE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009607937.13e-49PREDICTED: transcription factor bHLH18-like
RefseqXP_016508733.13e-49PREDICTED: transcription factor bHLH18-like
TrEMBLA0A1S4D5W68e-48A0A1S4D5W6_TOBAC; transcription factor bHLH18-like
STRINGXP_009607937.11e-48(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA88641628
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22760.11e-10bHLH family protein