PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Ctg13350408g00001.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family NAC
Protein Properties Length: 172aa    MW: 19912.2 Da    PI: 10.3116
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Ctg13350408g00001.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM492e-15111223127
                          NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWk 84 
                                  +G  FhPtd el+ ++Lk+ ++g +++++  i+ ++iy  +  +L+          +  ++r k+++  k+  r+ ++g+Wk
  Peinf101Ctg13350408g00001.1  11 MGEGFHPTDVELI-NFLKRFLKGAPISTKCPIQPAKIYGDQLPSLE----------FLITRRFKHKKLHKNFIRTCTNGTWK 81 
                                  5788*********.9**********999655888888875433343..........5555555656667788999999**** PP

                          NAM  85 atgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyr 127
                                   + + +++++ kg++vg k+++v+ + ++p+  + +W+m+ey 
  Peinf101Ctg13350408g00001.1  82 GQTSGEPIKR-KGSVVGFKRSFVYLNTQEPTH-HKTWLMKEYF 122
                                  *********9.999***********9888885.566******6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100516.0149147IPR003441NAC domain
SuperFamilySSF1019412.35E-209146IPR003441NAC domain
PfamPF023651.9E-1113121IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    Send to blast
MSSIVPRSHI MGEGFHPTDV ELINFLKRFL KGAPISTKCP IQPAKIYGDQ LPSLEFLITR  60
RFKHKKLHKN FIRTCTNGTW KGQTSGEPIK RKGSVVGFKR SFVYLNTQEP THHKTWLMKE  120
YFVVDEFFRE NNIAKQDDFV ICRIKKNTKK KSVKDVAVTT VLVDEDVNDI ID
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019241184.13e-48PREDICTED: NAC domain-containing protein 78-like
TrEMBLA0A1J6KCJ07e-47A0A1J6KCJ0_NICAT; Nac domain-containing protein 78
STRINGXP_009789986.11e-46(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8141386
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33480.14e-13NAC domain containing protein 41