PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Ctg13350858g00001.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family MYB_related
Protein Properties Length: 104aa    MW: 11998.3 Da    PI: 5.1853
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Ctg13350858g00001.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding361.7e-111254445
                                 S-HHHHHHHHHHHHHTTTT..-HHHHHHHHTTTS-HHHHHHHHH CS
              Myb_DNA-binding  4 WTteEdellvdavkqlGgg..tWktIartmgkgRtlkqcksrwq 45
                                 WT+eEd+++ ++ + + g+  +W +Ia+ ++ g++l+++++++ 
  Peinf101Ctg13350858g00001.1 12 WTKEEDKIFENGLAIYSGDdnQWMKIAAALP-GKSLEEIIHHYE 54
                                 *******************************.**********96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129310.031161IPR017884SANT domain
Gene3DG3DSA:1.10.10.601.8E-6454IPR009057Homeodomain-like
SMARTSM007173.9E-8859IPR001005SANT/Myb domain
SuperFamilySSF466897.48E-121063IPR009057Homeodomain-like
PfamPF002492.0E-81254IPR001005SANT/Myb domain
CDDcd001671.43E-81257No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 104 aa     Download sequence    Send to blast
MSTDQTCNGS FWTKEEDKIF ENGLAIYSGD DNQWMKIAAA LPGKSLEEII HHYELLVEDV  60
NAIEAGNVPL PQYRRMQNLS HHKSRVSKTD VERRRGVAWT EEEH
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2cjj_A7e-17874774RADIALIS
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that coordinates abscisic acid (ABA) biosynthesis and signaling-related genes via binding to the specific promoter motif 5'-(A/T)AACCAT-3'. Represses ABA-mediated salt (e.g. NaCl and KCl) stress tolerance. Regulates leaf shape and promotes vegetative growth. {ECO:0000269|PubMed:26243618}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by salicylic acid (SA) and gibberellic acid (GA) (PubMed:16463103). Triggered by dehydration and salt stress (PubMed:26243618). {ECO:0000269|PubMed:16463103, ECO:0000269|PubMed:26243618}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016444771.15e-51PREDICTED: uncharacterized protein LOC107770029
SwissprotQ9FNN63e-24SRM1_ARATH; Transcription factor SRM1
TrEMBLA0A1S3XXU31e-49A0A1S3XXU3_TOBAC; uncharacterized protein LOC107770029
STRINGXP_009609269.18e-50(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA44541329
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08520.11e-26MYB family protein
Publications ? help Back to Top
  1. Wang T, et al.
    Salt-Related MYB1 Coordinates Abscisic Acid Biosynthesis and Signaling during Salt Stress in Arabidopsis.
    Plant Physiol., 2015. 169(2): p. 1027-41
    [PMID:26243618]
  2. Chen YS, et al.
    Two MYB-related transcription factors play opposite roles in sugar signaling in Arabidopsis.
    Plant Mol. Biol., 2017. 93(3): p. 299-311
    [PMID:27866313]