PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Ctg13358032g00001.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family MYB_related
Protein Properties Length: 212aa    MW: 25280.7 Da    PI: 7.1516
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Ctg13358032g00001.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding23.41.4e-07647347
                                 SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
              Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                                 +WT+eE e   + ++++G++ Wk  a ++g  + + ++k+ w+ +
  Peinf101Ctg13358032g00001.1  6 KWTEEEYEMVRKFHREHGPK-WKVLADELG--KHRFHVKDTWRRL 47
                                 8*****************99.********9..6788899988876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129411.566152IPR017930Myb domain
SMARTSM007170.55350IPR001005SANT/Myb domain
SuperFamilySSF466894.21E-9565IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.606.7E-8659IPR009057Homeodomain-like
PfamPF139212.1E-10765No hitNo description
PROSITE profilePS500907.93349117IPR017877Myb-like domain
SuperFamilySSF466896.61E-652117IPR009057Homeodomain-like
SMARTSM007170.02153119IPR001005SANT/Myb domain
CDDcd001670.0081657114No hitNo description
Gene3DG3DSA:1.10.10.601.5E-960117IPR009057Homeodomain-like
SuperFamilySSF466899.66E-697172IPR009057Homeodomain-like
PROSITE profilePS500907.131119172IPR017877Myb-like domain
SMARTSM0071789123174IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    Send to blast
RCETRKWTEE EYEMVRKFHR EHGPKWKVLA DELGKHRFHV KDTWRRLKLS NQKKGQWTQE  60
EYQTLFDLVN TDLRLKLSED KKSKYGMLRD NIPWSAISDK LSTRTAPSCC LKWYDQLTSP  120
MVAKGEWADA DDYHLIDALF VLDASCVEDV DWDNLLDHRP GEICRKRWNQ MVLHIDQCGN  180
RSFAEQIEVL AKRYRPDLAE VRETWDSKPI VP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019230671.11e-135PREDICTED: transcription termination factor 1-like
TrEMBLA0A314KJ031e-134A0A314KJ03_NICAT; Uncharacterized protein
STRINGXP_009760244.11e-135(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA10291429
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41020.11e-91MYB_related family protein