PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Ctg13415564g00002.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family B3
Protein Properties Length: 133aa    MW: 15212.5 Da    PI: 5.2722
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Ctg13415564g00002.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B336.21.1e-1121110598
                                  -..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-. CS
                           B3   5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld. 85 
                                   ++++  +++ ++lp k + +h  ++  +  +t+++    +W++kl  +k   +  + +GW++Fv + gLkegD +vF+l  
  Peinf101Ctg13415564g00002.1  21 ILSKSCIQKDDFILPPKIL-QHLPVTVVP--ITIRN-GQIEWNMKL--NKLCAKRRFFDGWSKFVTDTGLKEGDGLVFELLe 96 
                                  4455566666799999998.563343344..44444.6699*****..66555555668********************554 PP

                                  SS.SEE..EEEEE- CS
                           B3  86 gr.sefelvvkvfr 98 
                                   + ++ + +v++++
  Peinf101Ctg13415564g00002.1  97 CNnKSVKSKVQILD 110
                                  66688888888876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.40.330.101.6E-1211110IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019368.24E-1313103IPR015300DNA-binding pseudobarrel domain
CDDcd100174.17E-1016110No hitNo description
PROSITE profilePS5086311.03917112IPR003340B3 DNA binding domain
SMARTSM010197.6E-518112IPR003340B3 DNA binding domain
PfamPF023621.8E-918110IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 133 aa     Download sequence    Send to blast
MAYRNEESTP IDTSKPFFDS ILSKSCIQKD DFILPPKILQ HLPVTVVPIT IRNGQIEWNM  60
KLNKLCAKRR FFDGWSKFVT DTGLKEGDGL VFELLECNNK SVKSKVQILD GSFREELFQE  120
LGEGTSDNRV DIL
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA18192154
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.12e-06B3 family protein