PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Ctg13486332g00001.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family NAC
Protein Properties Length: 225aa    MW: 25792.7 Da    PI: 5.4008
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Ctg13486332g00001.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM38.73.1e-1229543128
                          NAM  43 ePwdLpkkvka....eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfy....kgrapkg 116
                                  ePw++ +++k+    +++  y  ++ +k +a +k+ +r++ +g+Wk + + kev +++g+lvg  k++ +y    + ++++ 
  Peinf101Ctg13486332g00001.1   2 EPWQIFQACKShdciNRNARYIITQLKKVKADKKNVSRTVGKGTWKPQDRGKEVRDTSGRLVGFVKSIKYYpskkSSSTNSN 83 
                                  79999653333233345577***************************************************76543345555 PP

                          NAM 117 ektdWvmheyrl 128
                                  ++ +W+m ey+l
  Peinf101Ctg13486332g00001.1  84 NNGEWLMREYSL 95 
                                  6889******97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100520.7671118IPR003441NAC domain
SuperFamilySSF1019411.7E-172118IPR003441NAC domain
PfamPF023657.4E-62295IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    Send to blast
KEPWQIFQAC KSHDCINRNA RYIITQLKKV KADKKNVSRT VGKGTWKPQD RGKEVRDTSG  60
RLVGFVKSIK YYPSKKSSST NSNNNGEWLM REYSLADNYL NAPQIKNKGF VICRIKKKEK  120
KGDNNEEVKN DGDVEDDVQE YINSVLQEDH VQEDVNGQSN DMVLLADHIE ENNNNEFYMI  180
DGESIGVSAL WGSADQVHVQ NQDHQFPLMW SSPDDIDLDT ISYCL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019238684.11e-58PREDICTED: NAC domain-containing protein 30-like
TrEMBLA0A1J6JUZ15e-50A0A1J6JUZ1_NICAT; Nac domain-containing protein 43
STRINGXP_009601217.13e-51(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA10241385