PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Ctg13584446g00001.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family C2H2
Protein Properties Length: 175aa    MW: 19993.2 Da    PI: 7.88
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Ctg13584446g00001.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.69.5e-0589111123
                                  EEETTTTEEESSHHHHHHHHHHT CS
                      zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                                  ++C++C k+F ++  L  H++ H
  Peinf101Ctg13584446g00001.1  89 FECQYCFKHFANSQALGGHQNAH 111
                                  89******************988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.160.603.0E-487115IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
SuperFamilySSF576673.78E-687116No hitNo description
PROSITE profilePS5015711.26189116IPR007087Zinc finger, C2H2
PROSITE patternPS00028091111IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009736Biological Processcytokinin-activated signaling pathway
GO:0009740Biological Processgibberellic acid mediated signaling pathway
GO:0010026Biological Processtrichome differentiation
GO:0048510Biological Processregulation of timing of transition from vegetative to reproductive phase
GO:0044212Molecular Functiontranscription regulatory region DNA binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 175 aa     Download sequence    Send to blast
MAKDIASIFL SPSSHSGENE STSKSCVENK RLKLFGVELD NKNNYYVSIP NKLGRKESVG  60
DGDHESVNSS SSTVSYDKVN KELEEIKKFE CQYCFKHFAN SQALGGHQNA HKKERMKKKR  120
LQLQARKASL SCYLQPFQNS NIINYQFYDP SLFGNSDQFT VYDESQISFC PYDQD
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016477028.15e-70PREDICTED: zinc finger protein 5-like
TrEMBLA0A1S4AKS91e-68A0A1S4AKS9_TOBAC; zinc finger protein 5-like
STRINGXP_009611707.16e-69(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA51362130
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10480.13e-17zinc finger protein 5