PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Ctg13715789g00001.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family bHLH
Protein Properties Length: 224aa    MW: 25659.6 Da    PI: 6.7281
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Ctg13715789g00001.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH24.45.3e-081662654
                                 HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHH CS
                          HLH  6 nerErrRRdriNsafeeLrellPkaskapskK.lsKaeiLekAveYIksL 54
                                 + +E++RR+++++ +++L + lP+     s+K ++  +    A++YIk+L
  Peinf101Ctg13715789g00001.1 16 KYVEKNRRNNLKNLYNQLYSKLPPH---ISQKeMTLPDQIDAAIKYIKNL 62
                                 568*********************9...88888***************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088810.5061062IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.7E-101282IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.108.4E-81480IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    Send to blast
MELGQICNSA PKLERKYVEK NRRNNLKNLY NQLYSKLPPH ISQKEMTLPD QIDAAIKYIK  60
NLNMKLEKSK MHLEELRMSN KRPESSMATQ EPTPINKSSP RIEIHEMNPT MLVILITGLD  120
TLATFYKIIR LLHEEGVEVV YANFSLNGNS MLQISHQSKI NGSSTVESKT TILSGKLKEL  180
LYGSSDDNDM ESLIHLWDYI VESEMLGFDS LELLPLETHK SSHI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009591015.15e-93PREDICTED: uncharacterized protein LOC104088099
TrEMBLA0A1U7YT302e-87A0A1U7YT30_NICSY; transcription factor bHLH120-like
STRINGXP_009591015.12e-92(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA52971427
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.15e-13bHLH family protein