PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Ctg13799461g00001.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family C2H2
Protein Properties Length: 189aa    MW: 21276.4 Da    PI: 6.3433
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Ctg13799461g00001.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2157e-052951123
                                 EEETTTTEEESSHHHHHHHHHHT CS
                      zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                                 y+C+ C++ Fs+   L  H+++H
  Peinf101Ctg13799461g00001.1 29 YRCSFCKRGFSNAQALGGHMNVH 51
                                 9********************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.160.604.2E-42755IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
SuperFamilySSF576671.62E-62755No hitNo description
SMARTSM003550.00482951IPR015880Zinc finger, C2H2-like
PROSITE profilePS5015711.512956IPR007087Zinc finger, C2H2
PROSITE patternPS0002803151IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0051973Biological Processpositive regulation of telomerase activity
GO:0003676Molecular Functionnucleic acid binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    Send to blast
MENDPSNSSE KYQRTWCSDE LGVSQIKFYR CSFCKRGFSN AQALGGHMNV HRKDRAKLRE  60
ISTDNLDIDQ KSVSPSRSAP VPSGDVLLQQ EVSGDDETSS PSKRRCVTPE EEHSDHHHNI  120
SKVKDGNHHH PISKSKDDNQ DLLNKNLLQL PLFVDSPSKE VINSEETREG NKDLLGANLN  180
YSIKADVEH
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009791594.12e-74PREDICTED: transcriptional regulator TAC1-like
TrEMBLA0A1U7XX914e-73A0A1U7XX91_NICSY; transcriptional regulator TAC1-like
STRINGXP_009791594.16e-74(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA74631626
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53820.13e-16C2H2 family protein