PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00015g04016.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family bHLH
Protein Properties Length: 253aa    MW: 28744.6 Da    PI: 7.409
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00015g04016.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH47.14.4e-1567114354
                               HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                       HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                               r+h+e+E+rRRdriN  +++Lr+l+P++     k ++Ka+ L  +ve+Ik+L
  Peinf101Scf00015g04016.1  67 RNHSEAEKRRRDRINAQLSTLRKLIPSS----EKQMDKAALLGSVVEHIKDL 114
                               78*************************8....577***************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.92364114IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.96E-1465121IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000109.4E-1367114IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.107.5E-1667117IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.25E-1167116No hitNo description
SMARTSM003531.9E-1270120IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd048732.96E-5160226No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    Send to blast
MMDHSFCSEF LPQEAAAHNE ESLFLVPQYP NSCDVTSFQL HNYPSYFPQW SESFEVSAED  60
RTATASRNHS EAEKRRRDRI NAQLSTLRKL IPSSEKQMDK AALLGSVVEH IKDLKERSTE  120
ISKVVSTPTD IDEVIIEHIN EEENKGCTRS RKDNMILKAS FCCDDRAELF SELQRAIKNL  180
KLRMMEADIT SLGGRIKGVF LVCPSDNAAE NVCMNSLKQS LRVVLCRIAI SSSTSSNRIK  240
SKRQRFFLPA QFS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1239244KSKRQR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016564908.11e-128PREDICTED: transcription factor bHLH51
TrEMBLA0A2G3CUE21e-128A0A2G3CUE2_CAPCH; Uncharacterized protein
STRINGPGSC0003DMT4000712931e-108(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA58202235
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40200.14e-31bHLH family protein