PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00019g16016.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family SRS
Protein Properties Length: 207aa    MW: 23490.3 Da    PI: 8.9337
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00019g16016.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF702190.56e-59131584154
                    DUF702   4 gtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalss 88 
                                t++CqdCGnqakkdC + RCRtCCksrg +C+th kstW+p+++rr r+  ++  ++++++ + +  ++++++l  ++ +   +
  Peinf101Scf00019g16016.1  13 STSRCQDCGNQAKKDCPYLRCRTCCKSRGNQCQTHEKSTWIPVSRRRPRHLLHHHHQQQQQQ-QLSTIQQQNQQL-LQNPKRYRE 95 
                               5789********************************************96666655444444.333344444433.333333333 PP

                    DUF702  89 tklssaeskkeletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154
                                + +   s     +++lP+evs +avfrcvrvssvd+  +++aYqt+v+igGhvfkGiLyd G++e
  Peinf101Scf00019g16016.1  96 NENP---SAVLGGQEDLPAEVSLPAVFRCVRVSSVDNVVDQYAYQTSVNIGGHVFKGILYDLGPAE 158
                               3333...344557788***********************************************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF051421.2E-5714157IPR007818Protein of unknown function DUF702
TIGRFAMsTIGR016231.0E-231758IPR006510Zinc finger, lateral root primordium type 1
TIGRFAMsTIGR016241.4E-24109156IPR006511Lateral Root Primordium type 1, C-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    Send to blast
TFKMMREEGS SLSTSRCQDC GNQAKKDCPY LRCRTCCKSR GNQCQTHEKS TWIPVSRRRP  60
RHLLHHHHQQ QQQQQLSTIQ QQNQQLLQNP KRYRENENPS AVLGGQEDLP AEVSLPAVFR  120
CVRVSSVDNV VDQYAYQTSV NIGGHVFKGI LYDLGPAESH HNNMAKESTS SGGFHQQLTT  180
NLTLPSYPSS FNPFMPGTQF FQLPKSS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019255330.13e-94PREDICTED: protein SHI RELATED SEQUENCE 1-like
TrEMBLA0A1J6I1127e-93A0A1J6I112_NICAT; Protein shi related sequence 1
STRINGXP_009607768.12e-89(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA41562445
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75520.14e-50SHI-related sequence 5