PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00032g08009.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family G2-like
Protein Properties Length: 342aa    MW: 38642.4 Da    PI: 5.147
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00032g08009.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like86.62.5e-27292342151
                   G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 
                               k r+rWt++LH+rF+++v++LGG++kAtPk+il+lm+ ++Lt++hvkSHLQ
  Peinf101Scf00032g08009.1 292 KSRIRWTEDLHDRFLDCVNRLGGADKATPKQILNLMDSEDLTIDHVKSHLQ 342
                               68************************************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129410.209289342IPR017930Myb domain
Gene3DG3DSA:1.10.10.604.3E-24290342IPR009057Homeodomain-like
SuperFamilySSF466893.4E-13290342IPR009057Homeodomain-like
TIGRFAMsTIGR015573.1E-22292342IPR006447Myb domain, plants
PfamPF002491.8E-5296342IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 342 aa     Download sequence    Send to blast
MSIQRIVTQD RTHKNHDFAS DCTVEFSRTS AQDLVSQQLN SSYYMGYCFQ PAEGSEQQHQ  60
QSCDWPTDSS TSSTIISLIG SPYSAFFATE RCLGLTPDDN QDNISQLINN YDLQMSTYPQ  120
QCKNQFLETI AQAEPDFQHK ISLPSELSTQ DTSQLTYNYD LNQDNTSQLI DHYDLQMSSY  180
PQQCRNGFLE GSTAEAEAIF QHKISLPSEF SISQPLCPAA PFSHPFGKNE LLGEFGTSYR  240
RHPLLPFDGN QNYSLSHDLC NSHLAKTRQQ SESPSLTCHN SASSGVPHKH NKSRIRWTED  300
LHDRFLDCVN RLGGADKATP KQILNLMDSE DLTIDHVKSH LQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A4e-15292342252Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B4e-15292342252Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A4e-15292342151Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B4e-15292342151Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C4e-15292342151Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D4e-15292342151Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A4e-15292342252Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C4e-15292342252Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D4e-15292342252Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F4e-15292342252Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H4e-15292342252Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J4e-15292342252Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009629806.11e-132PREDICTED: myb family transcription factor PHL5-like isoform X1
RefseqXP_009629807.11e-132PREDICTED: myb family transcription factor PHL5-like isoform X2
TrEMBLA0A1S4BLS81e-129A0A1S4BLS8_TOBAC; uncharacterized protein LOC107809695 isoform X1
TrEMBLA0A1S4BLX61e-129A0A1S4BLX6_TOBAC; uncharacterized protein LOC107809695 isoform X2
STRINGXP_009629806.11e-131(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA24912458
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06800.24e-24G2-like family protein