PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf00032g28030.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

bZIP

Protein Properties

Length: 214aa MW: 23193.5 Da PI: 10.3083

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf00032g28030.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	31.1	5.1e-10	168	208	5	45
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 k rr+++NReAAr+sR+RKka++++Le+ +L++ ++L Peinf101Scf00032g28030.1 168 KSLRRLAQNREAARKSRLRKKAYVQQLENSRLKLSQLEQEL 208 778*************************9887777766655 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50217	9.611	166	214	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	4.5E-7	168	208	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	2.65E-6	168	210	No hit	No description
Gene3D	G3DSA:1.20.5.170	2.7E-7	170	207	No hit	No description
PROSITE pattern	PS00036	0	171	186	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 214 aa Download sequence Send to blast
MASTIGTQGN RSGTTGMPSF ISQIPASNPM GTEGNNRNTS RMSEFGVLEQ YLGFRIGDGA 60 NVNGTAGLDV SGTINKTLAP SNTSFSAAIP VSQTLQLQKG PQANLVSRFG THHENWGESN 120 MADSSSRTDT SNDMDGDDKN QRIETGQSGG IAASDSSDKS KEKVLDQKSL RRLAQNREAA 180 RKSRLRKKAY VQQLENSRLK LSQLEQELQR ARQQ

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	GQ386946	2e-83	GQ386946.1 Capsicum annuum leucine zipper transcription factor TGA (TGA) mRNA, complete cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	NP_001312268.1	1e-111	TGACG-sequence-specific DNA-binding protein TGA-2.1
Refseq	XP_009602601.1	1e-112	PREDICTED: TGACG-sequence-specific DNA-binding protein TGA-2.1-like
Refseq	XP_009759888.1	1e-111	PREDICTED: TGACG-sequence-specific DNA-binding protein TGA-2.1
Swissprot	O24160	1e-112	TGA21_TOBAC; TGACG-sequence-specific DNA-binding protein TGA-2.1
TrEMBL	A0A1S3Z386	1e-110	A0A1S3Z386_TOBAC; TGACG-sequence-specific DNA-binding protein TGA-2.1
TrEMBL	A0A1U7V0F8	1e-110	A0A1U7V0F8_NICSY; TGACG-sequence-specific DNA-binding protein TGA-2.1
STRING	XP_009759888.1	1e-110	(Nicotiana sylvestris)
STRING	XP_009602601.1	1e-112	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA20455	2	2

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G12250.2	4e-21	TGACG motif-binding factor 6