PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00049g07032.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family WRKY
Protein Properties Length: 239aa    MW: 27065.5 Da    PI: 8.9414
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00049g07032.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY59.85.2e-19189227138
                               ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEE CS
                      WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkv 38 
                               ++Dg++WrKYGqK  kg+++pr+YYrCt a gCpv+k+ 
  Peinf101Scf00049g07032.1 189 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApGCPVRKQW 227
                               58***************************99******84 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.808.7E-20174232IPR003657WRKY domain
SuperFamilySSF1182901.96E-17182230IPR003657WRKY domain
PROSITE profilePS5081119.221184226IPR003657WRKY domain
SMARTSM007744.6E-13189236IPR003657WRKY domain
PfamPF031067.9E-17190231IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    Send to blast
MDISSKFESE KLETIDLSLK LDHEEPSNHE VNSSRKLSQL DAKIQSKEQE LGENSKIEEF  60
SVLQKKMNMM KEENKVLRKA VEQTMKDYQM MFKSPKEFDM NIKRSTPSPT SQEDDTKEGE  120
LGLSLTLLSS NSSARKETKE DDITTGFSPI QSNTSHGSYL GGGLTSQVTS PQNRKARVSV  180
RARCETATMN DGCQWRKYGQ KIAKGNPCPR AYYRCTVAPG CPVRKQWRIQ QRVHDFGGT
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by potassium deprivation. {ECO:0000269|PubMed:15173595}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016490862.13e-96PREDICTED: probable WRKY transcription factor 9 isoform X2
SwissprotQ9C9F03e-41WRKY9_ARATH; Probable WRKY transcription factor 9
TrEMBLA0A1S4BPP87e-95A0A1S4BPP8_TOBAC; probable WRKY transcription factor 9 isoform X2
STRINGXP_009800949.12e-65(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA72872129
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68150.15e-36WRKY DNA-binding protein 9