PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00049g08007.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family Trihelix
Protein Properties Length: 343aa    MW: 40001.9 Da    PI: 8.3336
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00049g08007.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix72.86.1e-2366152184
                  trihelix   1 rWtkqevlaLiearremeerlrrgk..lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrt.sessstcpyf 82 
                               rWt+++v++Li+a+++++e++ ++    kk++W+++s++m+erg ++sp+qC++k+++lnk++k+++++ +++t + ++ + ++ 
  Peinf101Scf00049g08007.1  66 RWTDEMVKLLITAVSYIGEDVWSNGmfPKKGKWRAISNVMAERGPHVSPQQCEDKFNDLNKKFKRLNDILGRGTaCSVVANPALM 150
                               8*****************9999865459********************************************9636666555555 PP

                  trihelix  83 dq 84 
                               + 
  Peinf101Scf00049g08007.1 151 EM 152
                               44 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138371.9E-2164179No hitNo description
PROSITE profilePS500906.48164125IPR017877Myb-like domain
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    Send to blast
MNQQVLSPDA METSRLNMYA AYNERSDAVE EVIARSEEKQ PFVYRRTRWR GKMIKEKQPA  60
VYSRMRWTDE MVKLLITAVS YIGEDVWSNG MFPKKGKWRA ISNVMAERGP HVSPQQCEDK  120
FNDLNKKFKR LNDILGRGTA CSVVANPALM EMMDLTPDVQ EEVKKLLSSK QLFYKEMCSY  180
NNQNRLFLPD DSELQQSVLL ALKRKDRDEP EYAVQDMPAK RMIVGEERGS NMVCASLNSI  240
TNSVPNVLNL NNNGIHDSAK NEEAETLQKE QEILHRLLQL KEQKLQIEAQ ILELEKQRYE  300
CLRFRSEEDR ELKKLKLDNK AMKLENEKLA IRIKRCEASF LKE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019251125.10.0PREDICTED: uncharacterized protein LOC109230045
TrEMBLA0A1J6IP690.0A0A1J6IP69_NICAT; Uncharacterized protein
STRINGXP_009798603.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA125851620
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76870.15e-65